Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242310g00003 ATGGGAAATTACAGGTTCAAATTATCAGATATGATCCCAAATGCTTGGTTCTACAAGCTCAGAGACATGAACAAATCATCAAGAAAGCACAAATCACCAACTCCTCCTCCTCCTCCTTCTCATCATCATCATCAATCCAACAAGAAAATCCAACAACCTTCAACAACCTCAAATTCATCAAAACCAAAGCAGCAATTCATCAACACAACTCCAAGAAAGTCCTATCACTTCACAAGAGAGCACATTTCACACACCACCACCACTTCCCCTCAAAAACCAAGAAAATCATCATCAAAACACAGAACATCAGAGTTCCAAGCAGCAGAGCCAGAATTCAGAGCAGACCGTGTTCTTCACACAGACTCTAATTCTAATTCTAAGTCTTCATCCATGGATGACATCATCATTGACGTGGACAACAACTCCATTTCCACAACAAAACCTCACATTAACAACAACAACAACAACAACAACAACAACAAACATCTTCTTCTTCCACCAATTCTCACCAAACCAAGGAACAACCAACACAAGAACAAGAACAAGAATTCTACCACTACTCCATGTTCTAGAAGATTCTCAGTTAGCTCAGCTGCAGGGGTGAGGAGGCTTAGGATCAAGATCAATTCGCCCAGAGTTTCTGGAGAAAGTTTCCGGAAACTCCATCAGCAGGCGAACGCATCAGTCAGCAGCAGCGGCCGAAGAGGAACAACTGCCTCTTCGGCCGCTGATACTACTGGTGCGTCCGCCTTGCGAAAGAAGAAGCTTCCGGATAGCTTCGCGATAGTAAAATCATCGCTGAATCCGCAAAGAGATTTCAGAGAATCAATGGTGGAGATGATTGTGGAGAACAACATAAGGAGTTCGAAGGAATTGGAGGATCTTCTTGCTTGTTACCTAACTCTGAATTCAGATGAGTATCATGGCTTAATCATCAACGTCTTCAAGCAAATTTGGTTTGATTTAACTGATAGTAACAATAACAATCACAATAACATGTACCAACAACAAGAATAA 1017 0.4169 MGNYRFKLSDMIPNAWFYKLRDMNKSSRKHKSPTPPPPPSHHHHQSNKKIQQPSTTSNSSKPKQQFINTTPRKSYHFTREHISHTTTTSPQKPRKSSSKHRTSEFQAAEPEFRADRVLHTDSNSNSKSSSMDDIIIDVDNNSISTTKPHINNNNNNNNNNKHLLLPPILTKPRNNQHKNKNKNSTTTPCSRRFSVSSAAGVRRLRIKINSPRVSGESFRKLHQQANASVSSSGRRGTTASSAADTTGASALRKKKLPDSFAIVKSSLNPQRDFRESMVEMIVENNIRSSKELEDLLACYLTLNSDEYHGLIINVFKQIWFDLTDSNNNNHNNMYQQQE 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242310g00003 338 MobiDBLite consensus disorder prediction 216 247 - -
Stsc242310g00003 338 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 128 325 IPR038933 GO:0045892
Stsc242310g00003 338 ProSiteProfiles OVATE domain profile. 262 321 IPR006458 -
Stsc242310g00003 338 MobiDBLite consensus disorder prediction 24 132 - -
Stsc242310g00003 338 Pfam DNA-binding domain 1 49 IPR025830 GO:0003677
Stsc242310g00003 338 MobiDBLite consensus disorder prediction 213 250 - -
Stsc242310g00003 338 MobiDBLite consensus disorder prediction 49 73 - -
Stsc242310g00003 338 MobiDBLite consensus disorder prediction 97 120 - -
Stsc242310g00003 338 NCBIfam uncharacterized plant-specific domain TIGR01568 261 323 IPR006458 -
Stsc242310g00003 338 MobiDBLite consensus disorder prediction 169 190 - -
Stsc242310g00003 338 Pfam Transcriptional repressor, ovate 266 322 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242310g00003 Stsc-Chr242310 27299 28534 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc242310g00003 Ovate 3.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242310g00003 - - adu:107485240 368.237