Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242290g00003 ATGGCGAAAAAGTGTGAAGAACATGCGGTGGGAATTGACCTTGGCACCACATACTCTTGTGTTGCCGTGTGGCAGGAGCAACATTGTCGTGTTGAGATCATTCATAATGATCAGGGCAACAAAACAACACCTTCCTACGTTGCATTCACTGAGAATCAAAGATTAATTGGAGATGCTGCTAAGAACCAGGCTGCCACTAACCCAACTAACACTGTCTTTGATGCTAAGAGATTGATTGGTAGGAAATATAGTGATCCGATTGTCAAGAATGATATCCTCATGTGGCCGTTTAAGGTCACTGCTGGCATTGATGATAAACCAATGATTATTGTCACTTACAAGGATCAAGAGAAGCACTTTTCTGCAGAAGAAAACTCATCTATGGACAGATTGGATGAGGCACAATCAAGTCCCACTTAA 420 0.4214 MAKKCEEHAVGIDLGTTYSCVAVWQEQHCRVEIIHNDQGNKTTPSYVAFTENQRLIGDAAKNQAATNPTNTVFDAKRLIGRKYSDPIVKNDILMWPFKVTAGIDDKPMIIVTYKDQEKHFSAEENSSMDRLDEAQSSPT 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242290g00003 139 PRINTS 70kDa heat shock protein signature 8 21 - -
Stsc242290g00003 139 PRINTS 70kDa heat shock protein signature 60 68 - -
Stsc242290g00003 139 PRINTS 70kDa heat shock protein signature 38 50 - -
Stsc242290g00003 139 MobiDBLite consensus disorder prediction 120 139 - -
Stsc242290g00003 139 FunFam heat shock 70 kDa protein-like 3 114 - -
Stsc242290g00003 139 FunFam Heat shock 70 kDa protein 4 46 121 - -
Stsc242290g00003 139 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Stsc242290g00003 139 Pfam Hsp70 protein 9 128 IPR013126 GO:0005524|GO:0140662
Stsc242290g00003 139 Gene3D - 2 129 - -
Stsc242290g00003 139 SUPERFAMILY Actin-like ATPase domain 8 128 IPR043129 -
Stsc242290g00003 139 PANTHER HEAT SHOCK PROTEIN 70KDA 9 128 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242290g00003 Stsc-Chr242290 14152 15208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242290g00003 1 128 Calmodulin-binding Proteins AT3G12580 72.656 8.49e-60 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242290g00003 K03283 - vvo:131625172 210.69