Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242287g00005 ATGCTTCTTACTTGGGCTACTCGGATTGTCTTCAGTTTTATGGCACAGGCTTTTGGGTATGCTGGTATTAACTACAGTTCAGCTACACTCAGCACTGCATTGCTCAACCTTGTTCCTGGCTTTACCTTTGTACTTGCCGTTCTTTTCAGGTTGGAACAACTTGATTGGAGAAACTCTAGCAGCTTAGCTAAATCATTGGGTACAATAGTATCGATTGCCGGTGCATTTGTTGCGACTTTGTACAAGGGCCCTGCAATTCTGACGGGACTATTGCCTACTAACTCATCTCCACAGCCACTTTTGTCACAAGATCCCAACTGGATACTCGGAGGACTATTTCTTGCAGCGGATTGTGTGATGGCTTCAGCATTTATAATCGTACAGGCATATGTTCTTAAGAAATTTCCAGCGGAGTTTATTGTTGTGTTCTTTTATTGTTTCTTCGTGGCCATTCAATCTGCTGTGACCTGTTTAGTTATGGAAAGAGACATCGGTGCTTGGAGCTTGGAACCAAAGCAAAGATTGCTCACAGTTCTATACTCGGCAGTCTTTGGTTCTGTCTTTCAAGTTAGTGTCACTACTTGGTGTTTGCGCCAGACAGGACCTGTTTTTGTTTCCATGTTCAAGCCCATAGGAATCGTCATATCGGTGGTCATAGGCGTTGCTTTCCTCGGTGATGCATTCTATCTCGGAAGTTTGGTTGGTGCTACTGTGATTGTTCTTGGGTTTTATTCTGTACTGTGGGGAAAAGCCAGAGATATTGAGCAAGTTAGCTTGGAATCAAGAGGGAAACAAACCCCTCTTTTGAAAGAAAACAATACTGAAGAGATATAA 834 0.4305 MLLTWATRIVFSFMAQAFGYAGINYSSATLSTALLNLVPGFTFVLAVLFRLEQLDWRNSSSLAKSLGTIVSIAGAFVATLYKGPAILTGLLPTNSSPQPLLSQDPNWILGGLFLAADCVMASAFIIVQAYVLKKFPAEFIVVFFYCFFVAIQSAVTCLVMERDIGAWSLEPKQRLLTVLYSAVFGSVFQVSVTTWCLRQTGPVFVSMFKPIGIVISVVIGVAFLGDAFYLGSLVGATVIVLGFYSVLWGKARDIEQVSLESRGKQTPLLKENNTEEI 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242287g00005 277 SUPERFAMILY Multidrug resistance efflux transporter EmrE 164 251 - -
Stsc242287g00005 277 PANTHER WAT1-RELATED PROTEIN 11 254 IPR030184 GO:0016020|GO:0022857
Stsc242287g00005 277 Pfam EamA-like transporter family 111 247 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242287g00005 Stsc-Chr242287 22303 25273 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242287g00005 15 265 Nodulin-like Gene Family AT3G28050 46.457 1.80e-76 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242287g00005 - - gmx:100804932 410.609