Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242277g00006 ATGAGTTTTCGCGCAGGCGGCCGTGGCGGCGGAAGCAGGAGGGGTGTCAACGGTGGAAATTTCAAGGGCGGCGGTGGTCCTTGTGGTGCGTGTAAGTTTCTTAGGAGAAAATGTATCCCAGGATGCATTTTTGCTCCATACTTTGATTCAGAGCATGGTTCATCCTACTTTGCATCTATGCACAAGATTTTTGGTGCTAGTAATGTTGCTAAGCTCCTTCTTAGACTTCCAGCTAATAAGAGGCTAGATGCAGTGATTACTATTTGTTATGAAGCACAATCAAGATTAAGAGATCCTGTTTTGGGTTGTGTGTCACAAATTGTTGCCCTTCAACAACAGGTGTCTATTTTGCAGAATGAAGTCAATTACCTGCAAAATTATTTTGCTACGGTGGAGATACCCCAACCGCCGTCAATTCCTCTGACTCAAGGAGTGATGACACCACCTATGTACTCAATTGTTGACTTACCGTCGGTCATCACTGTTAACCCTGCCACCGCACCCATGGCGGCGGCGGCGGCGGCTCCCTTTATTGATCCGCCCCTCATCGATCCATCGATGGTTCAATCTTCTTGGGCCATGCAGCAACGGGCCAGGATGGACCCACGCCATTACATGGCTGCTACTTCCGGCCCACTAGGCCCAATACCTGGTGTTGGTGGAGTTGATCTTCATACTGTTGCACGTGATCTCATGAGTCATCACGTGCATCCACATGCACTTGGTCAGGCTTCTGGTTCAAATGCTCGAAAGGGATGA 759 0.4888 MSFRAGGRGGGSRRGVNGGNFKGGGGPCGACKFLRRKCIPGCIFAPYFDSEHGSSYFASMHKIFGASNVAKLLLRLPANKRLDAVITICYEAQSRLRDPVLGCVSQIVALQQQVSILQNEVNYLQNYFATVEIPQPPSIPLTQGVMTPPMYSIVDLPSVITVNPATAPMAAAAAAPFIDPPLIDPSMVQSSWAMQQRARMDPRHYMAATSGPLGPIPGVGGVDLHTVARDLMSHHVHPHALGQASGSNARKG 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242277g00006 252 PANTHER LOB DOMAIN CONTAINING PROTEIN 24 130 - -
Stsc242277g00006 252 ProSiteProfiles LOB domain profile. 26 128 IPR004883 -
Stsc242277g00006 252 Pfam Lateral organ boundaries (LOB) domain 27 125 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242277g00006 Stsc-Chr242277 28741 32948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242277g00006 29 232 AS2 family AT2G45420 49.765 1.39e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc242277g00006 LOB 1.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242277g00006 K21994 - rcu:8270648 236.113