Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242276g00005 ATGGCTAATGATGGTTCAGGATCAGTGAGGGGTGTTGAGACATGGAAGACACAGTTAGCCCTGTCAATGGGGCCTTTAATCTATGGTGCATACCCTGTCATTACAAAAGTGGCACTCAATGATGGAATCAACCAACTAGTCTTCTGTGTCTACAGAGTTCTCATTGGCCTTTTAGTCCTTTCTCCTTTTGCTTATTTTCTAGAAAGGCAGACACGACCACCCCTTACTAAGCACCTACTCTTCTCATTCTTCTTGCTTGGTTTACTTGGGATATTTGGCAACCAACTTTTGTTTCTCATTGGTCTAAACTTGACTAATCCAACATATGCAGCAGCTGCACAGCCAGCCGTTCCAGTCTTTACATTTCTGTTTTCTACAATCATGGGCACAGAGAAAGTGAACTTGCTAAGATATGAGGGTATGGCAAAGGTTGGAGGGACTATTATATGTGTCTCTGGAGCCATATATCAATGGTGTTGTATCGCGGATATAGGATTTGATCAATTCAGTCTTGGGGTTATCTGCTTAATAGGGAATTGCATGTACATGGCGGTTTATCTATCCATTCAGGCAAAATTGTTGAAGAAGTACCCCACAAACCTGTCTCTCACAGCATATTCCTACTTCTTTGGAACTGTATTAATGGTGATAGTATCGCTTTTCATGACTGATGGGATAACTGACTGGAGTTTGACACAGTCAGAAATACTTGCTGTTCTTTATGCTGGAATTTTTGCATCTGCCCTTGGTTATGGACTGGTAGCATGGTGTAACAAGTTTGTGGGGCCAACAATGGTTTCCCTTTATAACTCCTTTCAACCTGCATTCTCTACCCTGTTGTCTCTAATTTTCCTTGGAAGTCCTGTTTACATGGGAAGGTGTTGTTTTGATTTCGGTACTCTGTTGTACTCTAATCTCCTCTTCGAAGTTGAGAGCTAG 939 0.4185 MANDGSGSVRGVETWKTQLALSMGPLIYGAYPVITKVALNDGINQLVFCVYRVLIGLLVLSPFAYFLERQTRPPLTKHLLFSFFLLGLLGIFGNQLLFLIGLNLTNPTYAAAAQPAVPVFTFLFSTIMGTEKVNLLRYEGMAKVGGTIICVSGAIYQWCCIADIGFDQFSLGVICLIGNCMYMAVYLSIQAKLLKKYPTNLSLTAYSYFFGTVLMVIVSLFMTDGITDWSLTQSEILAVLYAGIFASALGYGLVAWCNKFVGPTMVSLYNSFQPAFSTLLSLIFLGSPVYMGRCCFDFGTLLYSNLLFEVES 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242276g00005 312 PANTHER WAT1-RELATED PROTEIN 21 298 IPR030184 GO:0016020|GO:0022857
Stsc242276g00005 312 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 149 - -
Stsc242276g00005 312 Pfam EamA-like transporter family 171 289 IPR000620 GO:0016020
Stsc242276g00005 312 Pfam EamA-like transporter family 22 142 IPR000620 GO:0016020
Stsc242276g00005 312 SUPERFAMILY Multidrug resistance efflux transporter EmrE 208 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242276g00005 Stsc-Chr242276 25210 26933 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242276g00005 13 242 Nodulin-like Gene Family AT3G45870 53.846 8.47e-86 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242276g00005 - - psat:127119930 352.829