Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242268g00008 ATGATAATCATATTTGTATCTGAAGGTGCTCATACTATTGGGAGAGCAAGGTGTGTAGTATTTAGCAATAGATTATTCAACTTCTCAGGAACAGGTTCACCTGATCCAACACTAGACACTGCCATGCTTTCAGATCTCCAAAATTTGTGTCCCCAAAATGGTGATGGAAACACAACTGCTCCACTTGATAGGAACTCTACTGATCTATTTGACAGTCGTTATTTCCAGAACCTCGTCAACTCCAAGGGCCTTCTTAGTTCTGACCAGATACTCTTCTCTAGTGATGATGCTATTTCCACTACTAAGGCTTTGGTCCAAAACTACAGCAACAATGCTTCACTTTTCTTTGCAGATTTTGCTAATTCTATGATCAAGATGGGGAATATTAATCCTAAGGCTGGCTCTGATGGAGAGATTAGGAAGACTTGCAGGGTCGCGCTAAACCGGTTGGCGAGTTTCAGGCAGAGGCGTGGGAGCGGCAAGCATTTCCTTGGAGAAGACGCTGATGTGGAAGGCGCCACTCTACTGAAGACGGTTAATGGGACGCGCCACGTGACTGAAGGCGCTGAACGTGAAGGTGCCTCAGCCAACGTGGCATGGCGACCAATACAAGTTCTTACCGTTTCCAACCAGTAA 636 0.456 MIIIFVSEGAHTIGRARCVVFSNRLFNFSGTGSPDPTLDTAMLSDLQNLCPQNGDGNTTAPLDRNSTDLFDSRYFQNLVNSKGLLSSDQILFSSDDAISTTKALVQNYSNNASLFFADFANSMIKMGNINPKAGSDGEIRKTCRVALNRLASFRQRRGSGKHFLGEDADVEGATLLKTVNGTRHVTEGAEREGASANVAWRPIQVLTVSNQ 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242268g00008 211 SUPERFAMILY Heme-dependent peroxidases 9 146 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc242268g00008 211 Gene3D Peroxidase, domain 2 8 127 - -
Stsc242268g00008 211 PRINTS Plant peroxidase signature 2 14 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc242268g00008 211 PRINTS Plant peroxidase signature 77 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc242268g00008 211 PRINTS Plant peroxidase signature 121 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc242268g00008 211 PRINTS Plant peroxidase signature 61 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc242268g00008 211 ProSiteProfiles Plant heme peroxidase family profile. 1 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc242268g00008 211 Pfam Peroxidase 9 111 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc242268g00008 211 PANTHER PEROXIDASE 72-RELATED 8 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc242268g00008 211 FunFam Peroxidase 3 126 - -
Stsc242268g00008 211 Gene3D - 128 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242268g00008 Stsc-Chr242268 32299 33417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242268g00008 9 145 Peroxidase AT5G19890 62.774 5.23e-57 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242268g00008 K00430 - gmx:100814964 222.246