Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242268g00001 ATGATGAATTTTATGAGAAATCATTTCAGTGTAAAAGAAAAAGATTATTCTCCGCATTTTGAGCTCAAAGATGATCTTCATTTTGGATGGATTCGTAATGTGCAGGTTCTGATAAGAATTCGACCGAATGCTGCGGAGAAGATTGTGCAAGGACATGGAAGATGCTTGAAGCAGGAAAGTGCACAAACTTTGGCAGTTGCAGGAGTGTCCATGGTGGAGAATTGTTTGTCTGGTTACAACAGTTGTATCTTTGCCTATGGTCAGACAGGTAGCGGCAAGACATATACCATGATGGGTGAGATTAAAGAAACAGATGGGAATCTTACCGATGATAGTAGGATAACACCTAGAATATAA 357 0.395 MMNFMRNHFSVKEKDYSPHFELKDDLHFGWIRNVQVLIRIRPNAAEKIVQGHGRCLKQESAQTLAVAGVSMVENCLSGYNSCIFAYGQTGSGKTYTMMGEIKETDGNLTDDSRITPRI 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242268g00001 118 ProSiteProfiles Kinesin motor domain profile. 33 118 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc242268g00001 118 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 101 IPR027417 -
Stsc242268g00001 118 PANTHER KINESIN-LIKE PROTEIN KIN-12D 12 118 IPR044986 -
Stsc242268g00001 118 Gene3D Kinesin motor domain 31 118 IPR036961 -
Stsc242268g00001 118 Pfam Kinesin motor domain 61 106 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242268g00001 Stsc-Chr242268 6848 7757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242268g00001 71 99 Calmodulin-binding Proteins AT5G65930 65.517 9.83e-09 50.1