Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc242264g00005 | ATGTTTGAAGAGCAAGAGATTGAGATCCCTAGGCAGATAGGGTTGGTTCCTCCTCTCCCATTTGGAACCTTTGAATCTTTCAATAATAAAGCTTTACTGCCTACCATAGCTGATCCTCTTCCACCGCCGCTGCCGCCGCCGCATCTCGTCACTTCTTCTTGTTTGGGAGGAGCACATCAACTCCTTTCATTCAACAGATCCACTGCAAACAGTAATAATTCATGGGCAAGGGGAGAGGTAACAACAGCAGGAGATTGCATGATGATGATGATGATGAGGATGAGTAACAAAAGAAGTGGAGGTGGAGGAGGAGATATTGCAGCGGCGATGAAGATGAAAATAAAGAAGATGAAAGGGGGCAGTGGGAGAGGAAGAAGAAAGGTGAGAGAGCCTAGGTTTTGCTTCAAGACCATGAGCGATGTGGATCTCCTTGATGATGGCTACAAATGGAGAAAGTACGGTCAGAAAGTTGTCAAGAACACACAACACCCCAGAAGCTACTACCGTTGCACAGAAGAAAAGTGTAGAGTGAAGAAACAAGTGGAGCGGTTAGCTGAGGATCCAAGGATGATTATAACTACATACGAAGGAAGACATGTTCATTCTCCCTCTAACGACCTCCAAGACTCTGAAACTGCTTCTCAACTCACCGATTTCCTATGGTAG | 666 | 0.4565 | MFEEQEIEIPRQIGLVPPLPFGTFESFNNKALLPTIADPLPPPLPPPHLVTSSCLGGAHQLLSFNRSTANSNNSWARGEVTTAGDCMMMMMMRMSNKRSGGGGGDIAAAMKMKIKKMKGGSGRGRRKVREPRFCFKTMSDVDLLDDGYKWRKYGQKVVKNTQHPRSYYRCTEEKCRVKKQVERLAEDPRMIITTYEGRHVHSPSNDLQDSETASQLTDFLW | 221 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc242264g00005 | 221 | ProSiteProfiles | WRKY domain profile. | 139 | 204 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc242264g00005 | 221 | FunFam | WRKY transcription factor 57 | 130 | 204 | - | - | |
Stsc242264g00005 | 221 | Pfam | WRKY DNA -binding domain | 145 | 201 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc242264g00005 | 221 | SMART | WRKY_cls | 144 | 203 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc242264g00005 | 221 | Gene3D | WRKY domain | 131 | 197 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc242264g00005 | 221 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 101 | 204 | IPR044810 | GO:0003700 | |
Stsc242264g00005 | 221 | SUPERFAMILY | WRKY DNA-binding domain | 136 | 203 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc242264g00005 | Stsc-Chr242264 | 23110 | 25639 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc242264g00005 | 106 | 221 | WRKY Transcription Factor Family | AT4G39410 | 66.116 | 1.41e-55 | 177 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Stsc242264g00005 | WRKY | 5.7e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc242264g00005 | - | - | gmx:100127389 | 211.075 |