Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242258g00002 ATGGGTGGCCACGAACAAGCCATAAGCCTTGAACCCGAGAAGCAGAACCTTCTCAATGAACACCACGAGAAGCACTTCACCGCCGGGGAGATCGTCCGTGACATCATCATCGGAGTCTCTGACGGCCTCACCGTCCCCTTCGCCCTCGCCGCAGGCCTCTCGGGCGCCAATGCCACGTCGTCCATCGTGCTCACTGCCGGCATCGCCGAAGTTGCAGCGGGCGCCATCTCCATGGGCCTCGGCGGGTATCTGGCGGCAAAAAGCGAAGCGGATCACTACAAAAGAGAATTGAAAAGGGAGCAAGATGAAATCATCGCTGTTCCCGATACTGAAGCGGCGGAAGTAGCAGAAATTCTAGCACAATACGGAATAGAGGCACATGAATATGGACCCGTCGTCAATGCTCTCAGAAAGAATCCTCAAGCATGGCTTGATTTCATGATGAAATTTGAGCTGGGACTAGAAAAGCCAGATCCAAGGAGAGCATTACACAGTGCAATGACAATTGCCGTAGCTTACATATTGGGTGGCATTGTTCCACTCATTCCTTACATGTTCATTCCGAACGCAGCTGAGGCTGTTGTCATATCAGTGATTGTTACCTTATTTGCATTGCTCATCTTTGGCTATGCCAAGGGATATTTCACTGGCAACAGACCCTTCAGGAGTGCTTTCGAGACAACCCTAATTGGTGCCTTTGCCTCTGCTGCTGCTTTTGGTCTCGCAAAGGCTTTCCACACTTAG 744 0.5134 MGGHEQAISLEPEKQNLLNEHHEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADHYKRELKREQDEIIAVPDTEAAEVAEILAQYGIEAHEYGPVVNALRKNPQAWLDFMMKFELGLEKPDPRRALHSAMTIAVAYILGGIVPLIPYMFIPNAAEAVVISVIVTLFALLIFGYAKGYFTGNRPFRSAFETTLIGAFASAAAFGLAKAFHT 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242258g00002 247 Coils Coil 83 103 - -
Stsc242258g00002 247 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 17 245 IPR008217 GO:0005384|GO:0030026
Stsc242258g00002 247 Pfam VIT family 32 242 IPR008217 GO:0005384|GO:0030026
Stsc242258g00002 247 CDD CCC1 11 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242258g00002 Stsc-Chr242258 10131 12566 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242258g00002 1 243 Nodulin-like Gene Family AT3G43660 24.490 2.92e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242258g00002 K22736 - gmx:100793585 402.134