Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242243g00004 ATGAGCTCCGAGTCGACTCAGCGGGTCTTCCAGCTCAAGCACGACCCTTTAACCGGCAACTCCGAGTGGTTCATCATCGAAGATCAAAACGACGACGTTCCAAACTTCCCCAACCACCAGCACCTTCTAGCTACGACGTCGTATTTGGATATGCTTAACGATTCCCCAAGAAACACAGCATTTCGACAGGCCATTGAGAAAACCATCACCAAACCTTGCCGCGTTCTTGATATCGGTGCTGGAACTGGGTTGCTATCGATGATGGCTTCAAGAGCTATGAGTGGTGAAGGGTTTGTGACGGCGTGCGAGTCGTACCTTCCGATGGTGAAGTTGATGAAGAGAGTGCTGCGTGTTAACGGAATGGAAAGAAGAATCAGAGTCATCAATAAGCGTTCTGATGAACTCCATGTTGGTGTTGATGTGCCTTCACGTTTTGATGCACTTGTGAGTGAGATATTAGACTCAGAATTGCTGGGTGAGGGGCTCATACCGACCCTGCAACATGCACATGACAATTTATTGGTGGAAAACCCTTTGACTGTGCCATATCGAGCAACTACATACGGGCAGCTGGTTGAGAGTACATTCCTACAGAAGCTGCATGATTTACATAACAATGAGGCCAGTGCATTTGATGGAATTTGCCTTACCCCTACAGGACTTGAGAGTGTTTTAGGCATCAAACATCAGCAATATGCTATGCATTGTGATCCAATAGGGAAAGAAATAAAGTTGCTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTGGAAACGACCAGAGAGTTGTGGAGAAGCTGAGCTGTGCATAAAGGCGACTACTGGTGGTAGAGTTCATGCTGTTGTCTCATGGTGGGTACTTCAACTTGATCGTGAAGGAACAATCTATTACTCCACGGCTCCTAGGTGGACAAACTCAACAACCAGTACAAGTTCTGTTCATTGGTGTGACCACTGGAAACAGTGTGTTTGGTTCGTTCCTGGCAGTGGTGTTATGGTATCCAAAGGGGAAGAAGTTCATGTACATGCTACTCATAATGAAACTAGTATCTCATATAGTTTGTATGCTAAGGGACTAAAAACCGAGGTTTTGCACCATGGACTGAAAGCTGCAGATTTGCATCTTGTACTATCCCCTGAAAGGGCTGCAATCTATGGAGACAAAGAATGGAGGCTTTTGATGTGGAAAGCTGTAGAAAGTGCATTGGAGGGAAAAAGTCGTCCATTATGCTTGATTACGGATGATAGTGTATTTTTACCTCTCCTTGTGGCGCATCTTGCTGAAGAATCACATGTAATTTCATTGCTCCCGGGGCTGATGGATAGAGGTTCCCAATATTTGCAAGCTGTTGCTCAGGCAAATCATATATCACCCGATCGCATAGAAGTTCTCGGAAAAAGGGTGAAACAGCTCACCATAAATGATACACACGAGAAAAAGGTTGTTCTGTTAATTGCAGAACCTTTCTATCTTGGACTTGATGGCATGCTTCCATGGCAGAACCTGCGTTTTTGGAACGACCGGACCATACTTGATTCCATCCTCGCTTCAGATGCCGTGGTTATCCCTAGCAGAGGAATGTTGAAGGCTTGTGCCATCTCTCTTCCTGATCTTTGGAAAAGTCGCCATTGCTTGAATAAGATAGAAGGTTTTGACCATACCGTGGTAAACTCTACAATGGGGGCTTGTGGTCAACTACCTGGATTGGAAGAGGGTCCTTGTCTGCCATACTTCGTCTGGCAGTGTGGAGATTTTGATGTTCTTAGTGAGACATTTGATGTAATGGAGTTTGATTTCTCAAAACAAATAAGCCAGTGTCAAGGAAGATCTCAGGTTAAATTCACCAAGGCCGGGGTATGCCATGGATTTGTACTATGGATTGATTGGGTGATGGATCCACAAAATTCTTATGTGATATCAACTGGTCCAGATAAGAGGCATTGGAAGCAGGGGGTAAAGCTTCTTGGAACACCTAGAACAGTAGGACCAACCGACGCATCTGAAAACATCGAAGCATGTCGTTCTGCAGTTCTAGAAGCATCTTTTGATCCATCCAATGGGGACCTCAAAATTATACCTGATTTCTTATGA 2094 0.4451 MSSESTQRVFQLKHDPLTGNSEWFIIEDQNDDVPNFPNHQHLLATTSYLDMLNDSPRNTAFRQAIEKTITKPCRVLDIGAGTGLLSMMASRAMSGEGFVTACESYLPMVKLMKRVLRVNGMERRIRVINKRSDELHVGVDVPSRFDALVSEILDSELLGEGLIPTLQHAHDNLLVENPLTVPYRATTYGQLVESTFLQKLHDLHNNEASAFDGICLTPTGLESVLGIKHQQYAMHCDPIGKEIKLLSEPFKIFEFDFWKRPESCGEAELCIKATTGGRVHAVVSWWVLQLDREGTIYYSTAPRWTNSTTSTSSVHWCDHWKQCVWFVPGSGVMVSKGEEVHVHATHNETSISYSLYAKGLKTEVLHHGLKAADLHLVLSPERAAIYGDKEWRLLMWKAVESALEGKSRPLCLITDDSVFLPLLVAHLAEESHVISLLPGLMDRGSQYLQAVAQANHISPDRIEVLGKRVKQLTINDTHEKKVVLLIAEPFYLGLDGMLPWQNLRFWNDRTILDSILASDAVVIPSRGMLKACAISLPDLWKSRHCLNKIEGFDHTVVNSTMGACGQLPGLEEGPCLPYFVWQCGDFDVLSETFDVMEFDFSKQISQCQGRSQVKFTKAGVCHGFVLWIDWVMDPQNSYVISTGPDKRHWKQGVKLLGTPRTVGPTDASENIEACRSAVLEASFDPSNGDLKIIPDFL 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242243g00004 697 Gene3D - 184 367 - -
Stsc242243g00004 697 Gene3D Vaccinia Virus protein VP39 373 524 IPR029063 -
Stsc242243g00004 697 FunFam Protein arginine N-methyltransferase 1.6 184 367 - -
Stsc242243g00004 697 PIRSF Arg_N-mtase 7 694 IPR014644 GO:0006479|GO:0008168
Stsc242243g00004 697 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 447 666 IPR029063 -
Stsc242243g00004 697 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 362 697 IPR025799 GO:0016274|GO:0018216
Stsc242243g00004 697 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 48 351 IPR029063 -
Stsc242243g00004 697 Gene3D Vaccinia Virus protein VP39 40 183 IPR029063 -
Stsc242243g00004 697 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 32 356 IPR025799 GO:0016274|GO:0018216
Stsc242243g00004 697 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 446 666 IPR025799 GO:0016274|GO:0018216
Stsc242243g00004 697 FunFam Protein arginine N-methyltransferase 1.6 528 696 - -
Stsc242243g00004 697 Gene3D - 528 695 - -
Stsc242243g00004 697 FunFam Protein arginine N-methyltransferase 41 183 - -
Stsc242243g00004 697 FunFam Protein arginine N-methyltransferase 7 374 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242243g00004 Stsc-Chr242243 25121 29791 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242243g00004 50 188 C2H2 Transcription Factor Family AT3G12270 29.730 2.76e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242243g00004 K11438 - gmx:100785846 1094.34