Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242243g00003 ATGAGCTCCGAGTCGACTCAGCGGGTCTTCCAGCTCAAGCACGACCCTTTAACCGGCAACTCCGAGTGGTTCATCATCGAAGATCAAAACGACGACGTTCCAAACTTCCCCAACCACCAGCACCTTCTAGCTACGACGTCGTATTTGGATATGCTTAACGATTCCCCAAGAAACACAGCATTTCGACAGGCCATTGAGAAAACCATCACCAAACCTTGCCGCGTTCTTGATATCGGTGCTGGAACTGGGTTGCTATCGATGATGGCTTCAAGAGCTATGAGTGGTGAAGGGTTTGTGACGGCGTGCGAGTCGTACCTTCCGATGGTGAAGTTGATGAAGAGAGTGCTGCGTGTTAACGGAATGGAAAGAAGAATCAGAGTCATCAATAAGCGTTCTGATGAACTCCATGTTGGTGTTGATGTGCCTTCACGTTTTGATGCACTTGTGAGTGAGATATTAGACTCAGAATTGCTGGGTGAGGGGCTCATACCGACCCTGCAACATGCACATGACAATTTATTGGTGGAAAACCCTTTGACTGTGCCATATCGAGCAACTACATACGGGCAGCTGGTTGAGAGTACATTCCTACAGAAGCTGCATGATTTACATAACAATGAGGCCAGTGCATTTGATGGAATTTGCCTTACCCCTACAGGACTTGAGAGTGTTTTAGGCATCAAACATCAGCAATATGCTATGCATTGTGATCCAATAGGGAAAGAAATAAAGTTGCTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTGGAAACGACCAGAGAGTTGTGGAGAAGCTGAGCTGTGCATAAAGGCGACTACTGGTGGTAGAGTTCATGCTGTTGTCTCATGGTGGGTACTTCAACTTGATCGTGAAGGAACAATCTATTACTCCACGGCTCCTAGGTGGACAAACTCAACAACCAGTACAAGTTCTGTTCATTGGTGTGACCACTGGAAACAGTGTGTTTGGTTCGTTCCTGGCAGTGGTGTTATGGTATCCAAAGGGGAAGAAGTTCATGTACATGCTACTCATAATGAAACTAGTATCTCATATAGTTTGTATGCTAAGGGACTAAAAACCGAGGTTTTGCACCATGGACTGAAAGCTGCAGATTTGCATCTTGTACTATCCCCTGAAAGGGCTGCAATCTATGGAGACAAAGAATGGAGGCTTTTGATGTGGAAAGCTGTAGAAAGTGCATTGGAGGGAAAAAGTCGTCCATTATGCTTGATTACGGATGATAGTGTATTTTTACCTCTCCTTGTGGCGCATCTTGCTGAAGAATCACATGTAATTTCATTGCTCCCGGGGCTGATGGATAGAGGTTCCCAATATTTGCAAGCTGTTGCTCAGGCAAATCATATATCACCCGATCGCATAGAAGTTCTCGGAAAAAGGGTGAAACAGCTCACCATAAATGATACACACGAGAAAAAGGTTGTTCTGTTAATTGCAGAACCTTTCTATCTTGGACTTGATGGCATGCTTCCATGGCAGAACCTGCGTTTTTGGAACGACCGGACCATACTTGATTCCATCCTCGCTTCAGATGCCGTGGTTATCCCTAGCAGAGGAATGTTGAAGGCTTGTGCCATCTCTCTTCCTGATCTTTGGAAAAGTCGCCATTGCTTGAATAAGATAGAAGGTTTTGACCATACCGTGGTAAACTCTACAATGGGGGCTTGTGGTCAACTACCTGGATTGGAAGAGGGTCCTTGTCTGCCATACTTCGTCTGGCAGTGTGGAGATTTTGATGTTCTTAGTGAGACATTTGATGTAATGGAGTTTGATTTCTCAAAACAAATAAGCCAGTGTCAAGGAAGATCTCAGGTTAAATTCACCAAGGCCGGGGTATGCCATGGATTTGTACTATGGATTGATTGGGTGATGGATCCACAAAATTCTTATGTGATATCAACTGGTCCAGGTCACACCCAATTCCCTTATGAATATTGA 1962 0.445 MSSESTQRVFQLKHDPLTGNSEWFIIEDQNDDVPNFPNHQHLLATTSYLDMLNDSPRNTAFRQAIEKTITKPCRVLDIGAGTGLLSMMASRAMSGEGFVTACESYLPMVKLMKRVLRVNGMERRIRVINKRSDELHVGVDVPSRFDALVSEILDSELLGEGLIPTLQHAHDNLLVENPLTVPYRATTYGQLVESTFLQKLHDLHNNEASAFDGICLTPTGLESVLGIKHQQYAMHCDPIGKEIKLLSEPFKIFEFDFWKRPESCGEAELCIKATTGGRVHAVVSWWVLQLDREGTIYYSTAPRWTNSTTSTSSVHWCDHWKQCVWFVPGSGVMVSKGEEVHVHATHNETSISYSLYAKGLKTEVLHHGLKAADLHLVLSPERAAIYGDKEWRLLMWKAVESALEGKSRPLCLITDDSVFLPLLVAHLAEESHVISLLPGLMDRGSQYLQAVAQANHISPDRIEVLGKRVKQLTINDTHEKKVVLLIAEPFYLGLDGMLPWQNLRFWNDRTILDSILASDAVVIPSRGMLKACAISLPDLWKSRHCLNKIEGFDHTVVNSTMGACGQLPGLEEGPCLPYFVWQCGDFDVLSETFDVMEFDFSKQISQCQGRSQVKFTKAGVCHGFVLWIDWVMDPQNSYVISTGPGHTQFPYEY 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242243g00003 653 Gene3D - 184 367 - -
Stsc242243g00003 653 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 362 653 IPR025799 GO:0016274|GO:0018216
Stsc242243g00003 653 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 447 644 IPR029063 -
Stsc242243g00003 653 Gene3D Vaccinia Virus protein VP39 40 183 IPR029063 -
Stsc242243g00003 653 PIRSF Arg_N-mtase 7 652 IPR014644 GO:0006479|GO:0008168
Stsc242243g00003 653 Gene3D Vaccinia Virus protein VP39 373 524 IPR029063 -
Stsc242243g00003 653 FunFam Protein arginine N-methyltransferase 41 183 - -
Stsc242243g00003 653 FunFam Protein arginine N-methyltransferase 7 374 524 - -
Stsc242243g00003 653 Gene3D - 528 650 - -
Stsc242243g00003 653 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 32 356 IPR025799 GO:0016274|GO:0018216
Stsc242243g00003 653 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 446 646 IPR025799 GO:0016274|GO:0018216
Stsc242243g00003 653 FunFam Protein arginine N-methyltransferase 1.6 184 367 - -
Stsc242243g00003 653 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 48 351 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242243g00003 Stsc-Chr242243 24616 29791 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242243g00003 50 188 C2H2 Transcription Factor Family AT3G12270 29.730 3.05e-09 58.2