Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242232g00002 ATGGAAGCGAATGGAATAGGTGTTGGAATTTACACTTCATTGCTAGGATTAGAGAATAACAACAATTTGCAGCAGCATCAAATGGTTTATGCTACACATCATGACACTGAATCACACCCTTCACAGCAACAACAGCAGCAGCAAGGAATGAAGCATGGGTACAATTATTCTTCCAAGAAGCCACAGAGCAGCAACTTCAGTGATGAAGATGAACCTGGTGCTGGTGGTGGTTTCGGTGCAGATGAAAGCTCTGGTGACCCCAAGAGGAAGGCTTCTCCATGGCACAGGATGAAGTGGACCGACGCCATGGTTAGGCTCTTGATAATGGCGGTTTATTACATCGGAGATGAAGTTGGTTCAGAAGGTGTAGGTGGCGGTGGAGGCGGTGGTGATCCAGGTGGGAAGAAGAAGAACAGTGGGTTGCTTCAGAAGAAAGGGAAGTGGAAATCAGTGTCGAGGGCTATGATGGAGAAAGGGTTCTATGTTTCTCCTCAGCAATGTGAAGATAAATTCAATGACTTGAACAAGAGGTACAAGAGGGTCAACGATATTCTTGGAAGAGGAACAGCTTGTAGGGTGGTTGAGAATCAGAGCTTGTTGGAAACCATGGATTTGTCTCCCAAGATGAAAGAAGAGGTCAGGAAGCTTCTCAATTCTAAGCACCTTTTCTTTAGGGAAATGTGTGCTTACCATAACAGTTGCGCCCACGGTGCTGCTGCTGCTGCTTCTGGTGGTAATGCTCCGCACTCGGCTGAGGTGGGAACAGAACAACCGTTACAGATTCAACAACCGCAACCGCACCATCCGCCACAGCAGAGATGCTTCCATTCTTCGGTGAATGGAGTTGGGATGCTGAAAGATGACGATGATGACGAGGAGGAAGATGAATCTGAAGACTCTTCAGACGAAGATGAAGAGGAATCAGGAGAAGGTGGTGGATCAAGGGGTCAAGTAGAGGATGATGAGAATGATGTAGTGAGGTCAAGGAAGAGACAAAGGAACAACAAGGGAGGGTTCTGTGTGACGTCATCAGCACAATTGATGCAGCAGTTGAACAGCGAGGTTGCTGGGGTGCTGCAAGATGGAGGGAAGAATCCATGGGAGAAGAAGCAGTGGATAAAGAAGAGGGTGCTGCAGCTGGAGGAGCAGCAGGTGAGGTACCAAGTGGAGGCTTTTGAGCTTGAGAAGCAGAGGCTCAAGTGGGTGAGGTTCAGTTCCAAGAAGGAGAGGGACATGGAGAGGGATAAGCTTGAGAATGAGAGGAGGAGGTTGGAGAATGAGAGGCTGCTCTTGCTTCTTCGCCAGAAGGAGCTTGAATTCATTAGTCTTCATCACCTCAAGCACCAGCATCAACAACAACAGCAACATTCTTCTACTTAG 1380 0.4797 MEANGIGVGIYTSLLGLENNNNLQQHQMVYATHHDTESHPSQQQQQQQGMKHGYNYSSKKPQSSNFSDEDEPGAGGGFGADESSGDPKRKASPWHRMKWTDAMVRLLIMAVYYIGDEVGSEGVGGGGGGGDPGGKKKNSGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGRGTACRVVENQSLLETMDLSPKMKEEVRKLLNSKHLFFREMCAYHNSCAHGAAAAASGGNAPHSAEVGTEQPLQIQQPQPHHPPQQRCFHSSVNGVGMLKDDDDDEEEDESEDSSDEDEEESGEGGGSRGQVEDDENDVVRSRKRQRNNKGGFCVTSSAQLMQQLNSEVAGVLQDGGKNPWEKKQWIKKRVLQLEEQQVRYQVEAFELEKQRLKWVRFSSKKERDMERDKLENERRRLENERLLLLLRQKELEFISLHHLKHQHQQQQQHSST 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242232g00002 459 MobiDBLite consensus disorder prediction 239 337 - -
Stsc242232g00002 459 Gene3D - 99 180 - -
Stsc242232g00002 459 MobiDBLite consensus disorder prediction 124 144 - -
Stsc242232g00002 459 Coils Coil 377 397 - -
Stsc242232g00002 459 MobiDBLite consensus disorder prediction 32 92 - -
Stsc242232g00002 459 MobiDBLite consensus disorder prediction 32 69 - -
Stsc242232g00002 459 Pfam Myb/SANT-like DNA-binding domain 96 229 IPR044822 -
Stsc242232g00002 459 Coils Coil 407 434 - -
Stsc242232g00002 459 MobiDBLite consensus disorder prediction 286 309 - -
Stsc242232g00002 459 MobiDBLite consensus disorder prediction 253 278 - -
Stsc242232g00002 459 MobiDBLite consensus disorder prediction 310 331 - -
Stsc242232g00002 459 PANTHER F16F4.11 PROTEIN-RELATED 19 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242232g00002 Stsc-Chr242232 6922 8973 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc242232g00002 Myb_DNA-bind_4 2.6e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242232g00002 - - aip:107648773 607.446