Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242223g00006 ATGCATTACCCTCTGGATTCCTTGCCAACCAACTTTTCTGCGGAAAATCTAGTAATATTGGACTTGTCTTTCAACCTAATGGAAAAACTTTGGTGTGGAGTGAAGAATCTGGTGAATTTAAAGATCCTTAGATTATATAATTCCTTACGCTTGACCATGCTGCCAAACTTGTCAAAAGCCAGAAACCTTGAAATACTAGTTATTCGAAAGAGTTACAGTTTGCTTTGTGTACATGGATCGGTTTTTGGTCTCAACAAGCTTGAGGTATTGGATCTAGGAGGGTGCATTTCCCTTAGGCAGCTCCGAAGCCATATCCATTTGAGCTCTCTCCGGTATCTCTCTCTCGCTGGCTGCGTAAGACTACAAGACTTCTCAGTTACCTCAGAGAATATGAAAGAGTTGAACTTAGAGCTCACAGGTATCCAACAACTACCTGCATCTTTCGGGCATCAAAGCAAACTCGAAACGTTGCATCTAGGATTATCTGATATTCAAAGTCTTCCTGAAGCCATCAAGAATCTCACAAGGTTCAAGTATCTCAGCATCAGATATTGTTGGGACCTCAGGGCTTTACCAGAGCTTCCCCCATCCCTTGAGTTTCTAGATGCCACTGGATGCACATCACTCAAGAGAGTTTATTTTCCATCGTCGGTCGCCTTGCAGCTTAAGGAAAACAGGAAAAGTATTTTGTTCTGGAATTGCTTGAAATTGGATCAACACTCTCTTGATGCTATTGGGTTGAATGCACAAATCAATCTTAAGAAATTTGCATACCAGCATTTGTCAGCATTAACACATGACTACTATAAAGACAATGACAATGAAGCCATTTATGTGTATCCAGGAAGCGACGTTCCAAAGTGGTTGGTGTATAGAACATCACATGATTATGTAAATGTTGATATCTCTTCTTCGGCTGCGCCAGATTCCCCTCTGTTGGGCTTCATATTTTGCTTCATTTTTCCACGAATTGTCTCGGATGGTTTTGCTTTCAGGTTTACCATAAGTGTTGGTGAAGATGAAGGAAACAATGTGGAATTTTACATTGAGAGACCACTTGAAAAAATTGTTTCAGATCATGTGTATCTCGTGTATGATCACCGACTTACTCACTTCCTTAATAGCAGAACCAATGCTGAAGATCAGCAGAGGCTTAAAATTAAGGTTGCAGTGGTGACACAGACAGGGAAATCAGATTATGTGCCTGTGAAGCTAAAAGGGTTTGGGGTCAGTCCAATAAAAGTATCAGAATATCGAAATTTTATTCGGAAGATGGAATTGGTTGACAGGAGGAGGAAAGTTAAAGCTTTACATTCTGGAAATACTTCACTTGAAAGAATTTGCTTCCAAGATCAGAAAACTTACTTGGACTTCATTCAAGAAATCAACTATGTTGATGGCTGTTGGAAATTCAAACACCATCAATTCACAAATTACTCATATAGGTACTTTATTTGA 1458 0.3964 MHYPLDSLPTNFSAENLVILDLSFNLMEKLWCGVKNLVNLKILRLYNSLRLTMLPNLSKARNLEILVIRKSYSLLCVHGSVFGLNKLEVLDLGGCISLRQLRSHIHLSSLRYLSLAGCVRLQDFSVTSENMKELNLELTGIQQLPASFGHQSKLETLHLGLSDIQSLPEAIKNLTRFKYLSIRYCWDLRALPELPPSLEFLDATGCTSLKRVYFPSSVALQLKENRKSILFWNCLKLDQHSLDAIGLNAQINLKKFAYQHLSALTHDYYKDNDNEAIYVYPGSDVPKWLVYRTSHDYVNVDISSSAAPDSPLLGFIFCFIFPRIVSDGFAFRFTISVGEDEGNNVEFYIERPLEKIVSDHVYLVYDHRLTHFLNSRTNAEDQQRLKIKVAVVTQTGKSDYVPVKLKGFGVSPIKVSEYRNFIRKMELVDRRRKVKALHSGNTSLERICFQDQKTYLDFIQEINYVDGCWKFKHHQFTNYSYRYFI 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242223g00006 485 Gene3D Ribonuclease Inhibitor 2 127 IPR032675 -
Stsc242223g00006 485 SUPERFAMILY L domain-like 2 266 - -
Stsc242223g00006 485 Gene3D Ribonuclease Inhibitor 128 273 IPR032675 -
Stsc242223g00006 485 PANTHER LEUCINE-RICH REPEAT-CONTAINING 106 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242223g00006 Stsc-Chr242223 25477 28081 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242223g00006 2 219 WRKY Transcription Factor Family AT4G12020 37.826 2.87e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242223g00006 - - ahf:112776244 853.973