Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242194g00004 ATGGAAGACTATCAAGTAAGCATCCAACTCTTTCTAATTTGGCTAATCTCCACAATTGTAGTTCGAGCTATTCTCACAAGAAACCGCAACAATGGCGACCATCATCATAAAAACCCACCAAGCCCACCATCACTACCTATCATTGGACACCTTCACTTATTAGTCTCTTCATTACCGCATCAAAGCTTTAACAATCTCTCAGCCCGCTATGGACCCATCTTTCAAATCTCCCTCGGCTCATTCCCTTTTGTAGTAGTTTCCGCACCAGAAATCGTCAAGGAGTTTCTCAAAACACAAGAATATGCCTTCTCTGATCGCTTCGACATGTTGAGTACAAAAGATAACATAACTCATCGTTCAAAGGGGATGATATTCGCCCCTTATGGAAGCCATTGGAAGTTATTGAAGAAGCTTTCCATGTCAGAGCTTTTCGTCGGAAGAACCCTGGACCGGTTTCTTCCTTTAAGACGCGAAGAGACTCTGAGGTTCCTCAAAGGCTTGAAGAAGAAAGGGGAAGCTGGAGAAGCTGTTGATATTGGTGATGAACTCATTTCTCTCACTAATAACATCATTTCAAGAATGATAATGAGCATAAGGTGTTGTGAAATAGGAGGCGACGACTTAGATGATTCAAAAATGATAAGGGAGATGGTGAAAGAGGCTACGGAGCTTGCTGGGAAATTGAATAATGTTACAGAATTTATTTGGTTATTTAAGAACTGGGACTTGCAAGGGATGAATAAGAGGATTAAAAAGGTTATGGAGAGGTTTGATTCCATGATGGAGAGAATCATAAGGGAGCATGAGTTGGTAAGGAAGGAAAGGAAGGAAAAGGGAGATGATGTTGGAGAAGTAGTGAGAGATCTGCTTGATATTTTGCTGGAAATACATGAAGATAATAGGAGAATTGATGGGATTCAATTCACTAAAGAGACTATCAAGGCTTTCATCATGGATATATTCATGACAGGAACTGATACAACAGCCACAAGCATCGAATGGGCTCTAGCAGCGTTAATTAACAACCCACATGTGATGAAAAAAGCAAGACAAGAAATCGATTCAGTAACTGCAAACAACAGATTAATACAAGAATCAGATATAGCTAATCTTCCTTATTTGCAAGCCATTGTTAAAGAAACACTAAGACTTCATCCTGTTATTCCACTTTTTAATAGATATTCAACTAAGACCTCCATCATTTGTGGCTACAAAATTCCATCAAAGACTGCAGTGTTTATTAATTTGTGGTCCATGGGAAGGGATCCTAAGATTTGGGAGGATCCACTTGAGTTTAAACCTGAGAGGTTCCTTGATGAGGAAAGACAGTTATTAGATTTGAGAGGACAAAATTTTCAACTATTGCCATTTGGAACTGGACGAAGAATGTGCCCTGCAGCTTCACTAGCACTTCTAACAGTGCCTAGTAATCTTGCTACCTTGATTCAGTGCTTTGAATGGAAGGTTGATGGAATTGTTAGTATGAAGGAGAAACCTGGCCTCACACTTTGTAGAGCTCATCCTTTAACTTGTGTTCCAGTGCCTCGTTTAGGTCAATTGAGCTACCTTGGAGAAAATTAG 1581 0.3991 MEDYQVSIQLFLIWLISTIVVRAILTRNRNNGDHHHKNPPSPPSLPIIGHLHLLVSSLPHQSFNNLSARYGPIFQISLGSFPFVVVSAPEIVKEFLKTQEYAFSDRFDMLSTKDNITHRSKGMIFAPYGSHWKLLKKLSMSELFVGRTLDRFLPLRREETLRFLKGLKKKGEAGEAVDIGDELISLTNNIISRMIMSIRCCEIGGDDLDDSKMIREMVKEATELAGKLNNVTEFIWLFKNWDLQGMNKRIKKVMERFDSMMERIIREHELVRKERKEKGDDVGEVVRDLLDILLEIHEDNRRIDGIQFTKETIKAFIMDIFMTGTDTTATSIEWALAALINNPHVMKKARQEIDSVTANNRLIQESDIANLPYLQAIVKETLRLHPVIPLFNRYSTKTSIICGYKIPSKTAVFINLWSMGRDPKIWEDPLEFKPERFLDEERQLLDLRGQNFQLLPFGTGRRMCPAASLALLTVPSNLATLIQCFEWKVDGIVSMKEKPGLTLCRAHPLTCVPVPRLGQLSYLGEN 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242194g00004 526 PANTHER CYTOCHROME P450 98A9 11 518 - -
Stsc242194g00004 526 Pfam Cytochrome P450 39 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00004 526 SUPERFAMILY Cytochrome P450 39 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00004 526 CDD CYP93 71 513 - -
Stsc242194g00004 526 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00004 526 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00004 526 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00004 526 Gene3D Cytochrome P450 23 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00004 526 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00004 526 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00004 526 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00004 526 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00004 526 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00004 526 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00004 526 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00004 526 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00004 526 FunFam Cytochrome P450 family protein 30 511 - -
Stsc242194g00004 526 Coils Coil 346 366 - -
Stsc242194g00004 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242194g00004 Stsc-Chr242194 31870 37182 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242194g00004 1 522 Cytochrome P450 AT5G06900 44.253 4.24e-148 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242194g00004 K24188 - gmx:100805931 625.935