Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242194g00001 GACATATTTATGGCAGGAACAGACACATCAGCTACAACCATCGAATGGGCTCTAGCAGAATTAATCAACAACCCGAATGTGATGAAAAAAGCAAGAGAAGAAATCGATTCAATTACTGCTAACAAGAGATTAATACAAGAATCAGATCTGGCAAATCTTCCTTATTTGCAAGCCATTGTTAAAGAAACACTTAGACTTCACCCTGTAGTTCCACTTATTGGGAGATAA 228 0.3728 DIFMAGTDTSATTIEWALAELINNPNVMKKAREEIDSITANKRLIQESDLANLPYLQAIVKETLRLHPVVPLIGR 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242194g00001 75 PRINTS E-class P450 group I signature 14 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00001 75 PRINTS E-class P450 group I signature 57 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00001 75 PRINTS P450 superfamily signature 58 69 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00001 75 PRINTS P450 superfamily signature 5 22 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00001 75 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 73 - -
Stsc242194g00001 75 SUPERFAMILY Cytochrome P450 1 75 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00001 75 Gene3D Cytochrome P450 1 75 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00001 75 Pfam Cytochrome P450 1 75 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242194g00001 75 Coils Coil 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242194g00001 Stsc-Chr242194 12701 12928 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242194g00001 1 75 Cytochrome P450 AT3G20120 64.000 2.24e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242194g00001 K24188 - gmx:100805931 125.946