Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242188g00009 ATGCAAGAAAGGCTGAGGATTTTAAGTGAAGATGAAAACAATAAGAAGATGCTTTACGTAACTGAAGATGATATCAAGGCCTTACCTGAATTCCAGAATGAAACTCTTATAGCAATTAAAGCTCCCCATGGAACCACACTGGAAGTCCCGGAACCTGAGGAAGCTGTTGACTACCCACAGAGGAGATATAGGGTCATTCTTAGAAGCACAATGGGCCCCATTGATGTCTTCCTTATCAGTCAATTTGAGGAGAAATTCGAAGAGATGAGCTTTCCACTTGCTTCAAGTTCTGGGTCCAACGAACATCAAGCAGCAGAACAGTTTCCTGTTGAATGCAATGATAAAGGCCCTGAACCTCAAGCTCAACCTTCTTCTAATACCTGTTCTGATCTAAACACTGTACAAGAATTTGCTGGTGGCATGATGAAAATTGTTCCTTCAGCCGCTGATACTGATGCAGATTACTGGCTTCTATCAGATGTTGAAGCTAGCATAACAGACATGTGGAAAACAGATTGTATCCATCTTTCCAAACTTTTCATGCCTTTTCCTTTGTTTGACTTCCTCTGGCTTTCAATTTTTCTCGAAGTAGCATAG 597 0.4121 MQERLRILSEDENNKKMLYVTEDDIKALPEFQNETLIAIKAPHGTTLEVPEPEEAVDYPQRRYRVILRSTMGPIDVFLISQFEEKFEEMSFPLASSSGSNEHQAAEQFPVECNDKGPEPQAQPSSNTCSDLNTVQEFAGGMMKIVPSAADTDADYWLLSDVEASITDMWKTDCIHLSKLFMPFPLFDFLWLSIFLEVA 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242188g00009 198 Pfam E2F transcription factor CC-MB domain 1 80 IPR032198 GO:0046983
Stsc242188g00009 198 SUPERFAMILY E2F-DP heterodimerization region 1 81 IPR037241 -
Stsc242188g00009 198 CDD E2F_DD 1 81 IPR032198 GO:0046983
Stsc242188g00009 198 Gene3D - 1 81 - -
Stsc242188g00009 198 PANTHER TRANSCRIPTION FACTOR E2F 4 175 IPR015633 GO:0000978|GO:0006357
Stsc242188g00009 198 MobiDBLite consensus disorder prediction 111 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242188g00009 Stsc-Chr242188 25904 28394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242188g00009 2 172 E2F-DP Transcription Factor Family AT2G36010 57.297 7.68e-65 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242188g00009 K06620 - gmx:100811762 262.307