Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242176g00007 ATGGGAGAAGTGAAGCTAATTGCAACACATGAAAGCTTCCCATGTGCAAGAATAGAATGGAGTCTGAAGATAAAGGGTGTGGAATATGAATACCTGAAAGAGGATCTGTCTAACAAGAGTGATTTGCTTATTGAGTCAAATCCTGTTCACAAGAAAGTCCCTGTTCTTATTCACAACGGAAAGCCAATTGCTGAGTCACTTGTGATTCTTGAGTACATAGATGAGACATGGAAGGACAACAACAACCACCTTTTGCTGCCACAGGATCCTTATGACAGGGCACTGGCTCGATTCTGGGCTAGATTCATTGATGAGAAGTGTGTGATGAGTGTATGGCAAGCTTGTGTGGCCCAACAAGGGGAAGAGAAAGAGAAAGCTGTGGAAGCTGCACTTGAGACACTTTCCCTTCTTGAGAACCAAATTAAAGGGAAGAAGTTCTTTGGTGGAGAGAAGATAGGGTACCTTGACATTGTAGCTGGTTGGTTATCTTATTGGCTGAGTGTTCTTGAAGAGCTTGGAGAGATTGAACTCGTTAATGCTGAGAGGTTCCCATTTCTTCATGAATGGGCAAACAACTTCATCAACACTTCACCCATCAAAGATTGCATTCCACCCAGAGAAGATGTTCTTGCTTATTTCAGCTTTGGCATCAATTATGTGCGTTCCATGCATGGCACCCAATAA 684 0.4284 MGEVKLIATHESFPCARIEWSLKIKGVEYEYLKEDLSNKSDLLIESNPVHKKVPVLIHNGKPIAESLVILEYIDETWKDNNNHLLLPQDPYDRALARFWARFIDEKCVMSVWQACVAQQGEEKEKAVEAALETLSLLENQIKGKKFFGGEKIGYLDIVAGWLSYWLSVLEELGEIELVNAERFPFLHEWANNFINTSPIKDCIPPREDVLAYFSFGINYVRSMHGTQ 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242176g00007 227 Gene3D - 89 220 - -
Stsc242176g00007 227 Pfam Glutathione S-transferase, N-terminal domain 16 75 IPR004045 -
Stsc242176g00007 227 CDD GST_N_Tau 4 77 - -
Stsc242176g00007 227 Pfam Glutathione S-transferase, C-terminal domain 111 195 IPR004046 -
Stsc242176g00007 227 SFLD Glutathione Transferase (cytosolic) 1 215 IPR040079 -
Stsc242176g00007 227 Coils Coil 120 140 - -
Stsc242176g00007 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 212 IPR010987 -
Stsc242176g00007 227 CDD GST_C_Tau 90 215 IPR045074 GO:0004364|GO:0006749
Stsc242176g00007 227 SFLD Main.3: Omega- and Tau-like 1 215 IPR045073 -
Stsc242176g00007 227 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 209 IPR045073 -
Stsc242176g00007 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Stsc242176g00007 227 SUPERFAMILY GST C-terminal domain-like 75 215 IPR036282 -
Stsc242176g00007 227 Gene3D Glutaredoxin 1 87 - -
Stsc242176g00007 227 FunFam Tau class glutathione S-transferase 86 223 - -
Stsc242176g00007 227 SUPERFAMILY Thioredoxin-like 4 107 IPR036249 -
Stsc242176g00007 227 FunFam Tau class glutathione S-transferase 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242176g00007 Stsc-Chr242176 22588 24156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242176g00007 3 213 Glutathione S-transferase Gene Family AT2G29420 48.341 1.10e-72 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242176g00007 K00799 - gmx:547587 342.813