Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242176g00002 ATGGGAGCTCTCTACTTCGCAACAGCCCTGGGGTGGAATGAATCCGAGGAGGAGAGAGTAAAGGGAAAGATAGTTGAAGTTGGAAGAGCACATTTTGAAACAGAGACAACAAGGTTTACAATTTTGGATGAACCTGGTCACAAAAGTTATGTACCTAACATGATCAGTGGTGCATCTCAGGCTGATATTGGAATGTTGCTGAGTTTATCTATGATGTAA 219 0.4201 MGALYFATALGWNESEEERVKGKIVEVGRAHFETETTRFTILDEPGHKSYVPNMISGASQADIGMLLSLSMM 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242176g00002 72 Gene3D - 9 68 IPR027417 -
Stsc242176g00002 72 PANTHER TRANSLATION FACTOR 4 66 - -
Stsc242176g00002 72 Pfam Elongation factor Tu GTP binding domain 14 67 IPR000795 GO:0003924|GO:0005525
Stsc242176g00002 72 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 67 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242176g00002 Stsc-Chr242176 5270 5899 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242176g00002 6 67 Eukaryotic Initiation Factors Gene Family AT5G10630 46.774 5.38e-14 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242176g00002 K03267 - rcu:8275735 100.138