Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242173g00005 ATGGAGACGCAGCGGATAATGGAGTTTCCGCATAGGAGCGTAGACAAGAGGCCAAGGAAGAGGCCTCGTTTAACATGGGACATGCCTCCTCCTCCGCCTCCTATTCCTCCTCCTCTTCCTTCCAAGGTTCTTCCAGCTTCAAATCGCAGCCAGGGGGTTGGGAATGGCATTGTTTCAAATCATGTTTATTCATCATCCATGTTTTATAGGGGAATGTCTCGCAATGGATCACCCCCTTGGAGGCCTGATGATAAAGATGGTCACTATGTTTTCGCAGTGGGTGAAAATTTAACACCTCGATACAGGATTCTTGGTAAGATGGGTGAAGGAACATTCGGTCAAGTCTTGGAATGTTTTGACAATGAAAAGAAAGAAGTTGTGGCAATTAAAATTGTTCGCTCCCTAATCAAGTATCGTGAGGCTGCAATGACTGAAATTGATGTGTTGATGAGGCTAGCCAAACATGATGTTTCTGGTGCTCGTTTTGCTGCACGTATTCTCAACAACTCACAAATATCAAAATTTAACATCCATTCTCTTTTGTCGGCACATTCTTCATTTGTGACATTAAAGTTTTTATCACGGACCACAAAAGATGGCTCCTATTTCAAGAATCTTCCCAAGACAAGTTCCATTAAACTCATTGATTTTGGGAGTACGACATTTGAGCATCAAGATCATAGTTATGTGGTGTCAACAAGACATTATCGTGCGCCAGAAGTTATCTTAGGTCTTGGATGGAACTATCCTTGTGACCTTTGGAGTGTAGGCTGCATACTAGTTGAACTTTGCACAGGTGAGGCACTTTTCCAAACGCACGAGAACTTGGAACATCTTGCCATGATGGAGCGAGTTTTAGGGCCACTACCTCCCCAAATGGTGGTCAGGGCTGAGTAA 897 0.437 METQRIMEFPHRSVDKRPRKRPRLTWDMPPPPPPIPPPLPSKVLPASNRSQGVGNGIVSNHVYSSSMFYRGMSRNGSPPWRPDDKDGHYVFAVGENLTPRYRILGKMGEGTFGQVLECFDNEKKEVVAIKIVRSLIKYREAAMTEIDVLMRLAKHDVSGARFAARILNNSQISKFNIHSLLSAHSSFVTLKFLSRTTKDGSYFKNLPKTSSIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPPQMVVRAE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242173g00005 298 Gene3D Phosphorylase Kinase; domain 1 77 179 - -
Stsc242173g00005 298 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 187 297 - -
Stsc242173g00005 298 MobiDBLite consensus disorder prediction 25 43 - -
Stsc242173g00005 298 MobiDBLite consensus disorder prediction 1 51 - -
Stsc242173g00005 298 ProSiteProfiles Protein kinase domain profile. 101 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc242173g00005 298 MobiDBLite consensus disorder prediction 1 24 - -
Stsc242173g00005 298 SMART serkin_6 101 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc242173g00005 298 Pfam Protein kinase domain 209 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc242173g00005 298 Gene3D Transferase(Phosphotransferase) domain 1 207 296 - -
Stsc242173g00005 298 SUPERFAMILY Protein kinase-like (PK-like) 93 294 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242173g00005 Stsc-Chr242173 25442 29760 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242173g00005 213 295 EF-hand Containing Proteins AT5G22840 40.449 2.99e-16 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Stsc242173g00005 Pkinase 9.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242173g00005 K08287 - gmx:100808061 427.172