Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242167g00003 ATGGCAAATCTCAATTATGTTGTGTGTAGTGTGATGATCACCACCTTAGCATTCTCACTTTTCATTACTTGTGATGCTAATAACAATAAAGATGATAATCCAAAACTTCATATTGTTTATATGGGCTCATTACCCGAAACAATAAATTCTTACTCTCCAACTTCTCACCATCTCAACTTGCTGCAACAAGTTCTTGATGGTAGCAGCAACCCAGCAAATTCCTTAGTCCGTAGCTACAAAAGGAGTTTCAATGGTTTTGCTGCTATGCTCACGAATGAGCAAGCTGCAAAGTTAGCAGAGATGGAAGATGTTGTGTCGGTTTTTCCAAGCATGACATTCCAAACCCAAACAACAAGATCATGGGATTTCTTAGGATTTCCAAAGGCAGTAAAAAGACAACCTAGAAGCATAGAAAGCAATCTCGTGGTGGGAGTTATCGACACTGGAATTTGGCCTGAATCAGAAAGCTTCAATGACAAAGGATTCACCGGCCCTGCTCCAAAGAAGTGGAAGGGTACTTGTGCAGGTGGCAAGAACTTCACATGCAACAAGAAACTAATCGGAGCAAGATTCTACGTAGATGACTCTGCAAGAGACGGTATAGGCCATGGAAGCCATACAGCATCAACAGCAGCAGGAAACTATGTTGATGATGTTGGCTTCTATGGCATTGCACAAGGCACTGCTAGAGGAGCAGTTCCTTCTGCAAGAATTGCTGTTTATAAAATCTGCAATGATAGTGGCTGTCCCAGTGCTGGCATCTTAGCTGCATACGATGATGCAATTGCTGATGGAGTTGACATCATTTCCATTTCAGTTGGTGGTTCATTCGCACTGACTCTAGAAGTTGATCCTATTGCCATTGGTGCCTTTCATGCTATGGCCAAAGGGGTACTTGTATCCCAGTCAGCTGGTAATTCCGGTCCGATACTTTCATCTGTAGCAAGCATAGCGCCATGGTTGATAAGTGTAGCAGCAAACACTATAGACCGCCGGATCGTTGACAAGGTGCTTCTCGGCAACGGAAAAGTGTTGACCGGGAACACAGTTAATTCTTTCGAGTCTAATGGAAGACAAGTTCCTATAGCATTGAGTAACGGCAATTCAAGTCTGTGTCCAAAAGAATCTGCTGACCTATGTCAATGCTTGGATCCAAAACTGGTGAATGGAAAGATAGTTTTATGTGAGCAGTATAACGATGCTGTACCCAAAGATTCTGGTGCAGCTGGTGCAGTTGTAAATGCTGATACTGGTAATGTGGGCTATGTACAATTATTGCCATTCGCGGCATTGCTACTACAAGATTTTGAATTGATTAAATCCTACAGAAACTCAACAAAGGAACCAAGAGCTGAGATACGCAAGAGTGAGAGTGCTAGAGATCCTAATGCTCCTAAAGTGGCAACATTTTCTGGTCGTGGACCAAACCCCGTCATTCCAGAGATCTTGAAACCTGATGTAAGTGCCCCAGGAGTTGACATATTGGCTGCTTTTTCTCCAATTGCTACACCAACAGAAGATCTTGAGGATAAAAGATCAGTGAATTACAGCATTTTGAGTGGAACTTCAATGTCTTGTCCTCATGTTTCTGGAATAGCCACATATGTGAAGAGCTTTCATCCTGATTGGTCACCTGCTGCAATTAAATCTGCTATTTTGACATCAGCAACACCCATGGTTAGAAGTTCTGTGCATGATGTGGGAGAATATGCATATGGATCTGGACAAGCCAATCCACTTAAAGCACTCAACCCTGGACTGGTTTATGACATTAACAAGGGAGACTATGTTCAAATGCTCTGCAACTTAGGGTATCATAATGCCACAGTTAAGCTGATATCTGGAGAGGTTAATCCATGCAAGGGAGCCGCAAATAGATCATTGGTAAGAAGCCTAAATTATCCAACTTTTGCAGCTCAGATTAAACCCAATGTGCCTTTTAATCTAAGTTTTGGTAGAACAGTTACAAATGTTGGGTTAGCCAATTCAAGTTACAAGGGAACAATCACAGCGATTCCTGAACTTAAGATCACAGTAACACCAACGGTTTTATCATTCAAAGCATTAAACGAGAAAAAATCGTTTGTATTGAATGTGAGTGGTAAGGTAACAAGAAAAACTGTGGCTATCTCATCAATAGTATGGTCAGATGGAACCCATAATGTTAGAAGCCCAATTGTTATAGATGTTTCATCAGGTGATCAGGATGAACCATGA 2217 0.4172 MANLNYVVCSVMITTLAFSLFITCDANNNKDDNPKLHIVYMGSLPETINSYSPTSHHLNLLQQVLDGSSNPANSLVRSYKRSFNGFAAMLTNEQAAKLAEMEDVVSVFPSMTFQTQTTRSWDFLGFPKAVKRQPRSIESNLVVGVIDTGIWPESESFNDKGFTGPAPKKWKGTCAGGKNFTCNKKLIGARFYVDDSARDGIGHGSHTASTAAGNYVDDVGFYGIAQGTARGAVPSARIAVYKICNDSGCPSAGILAAYDDAIADGVDIISISVGGSFALTLEVDPIAIGAFHAMAKGVLVSQSAGNSGPILSSVASIAPWLISVAANTIDRRIVDKVLLGNGKVLTGNTVNSFESNGRQVPIALSNGNSSLCPKESADLCQCLDPKLVNGKIVLCEQYNDAVPKDSGAAGAVVNADTGNVGYVQLLPFAALLLQDFELIKSYRNSTKEPRAEIRKSESARDPNAPKVATFSGRGPNPVIPEILKPDVSAPGVDILAAFSPIATPTEDLEDKRSVNYSILSGTSMSCPHVSGIATYVKSFHPDWSPAAIKSAILTSATPMVRSSVHDVGEYAYGSGQANPLKALNPGLVYDINKGDYVQMLCNLGYHNATVKLISGEVNPCKGAANRSLVRSLNYPTFAAQIKPNVPFNLSFGRTVTNVGLANSSYKGTITAIPELKITVTPTVLSFKALNEKKSFVLNVSGKVTRKTVAISSIVWSDGTHNVRSPIVIDVSSGDQDEP 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242167g00003 738 Gene3D Peptidase S8/S53 domain 141 596 IPR036852 GO:0004252|GO:0006508
Stsc242167g00003 738 Gene3D - 330 460 - -
Stsc242167g00003 738 MobiDBLite consensus disorder prediction 447 461 - -
Stsc242167g00003 738 Pfam Fibronectin type-III domain 632 728 IPR041469 -
Stsc242167g00003 738 CDD PA_subtilisin_like 337 453 - -
Stsc242167g00003 738 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 38 727 IPR045051 -
Stsc242167g00003 738 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 115 IPR037045 -
Stsc242167g00003 738 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Stsc242167g00003 738 PRINTS Subtilisin serine protease family (S8) signature 199 212 IPR015500 -
Stsc242167g00003 738 PRINTS Subtilisin serine protease family (S8) signature 520 536 IPR015500 -
Stsc242167g00003 738 Pfam Subtilase family 139 559 IPR000209 GO:0006508|GO:0008236
Stsc242167g00003 738 ProSiteProfiles Serine proteases, subtilase domain profile. 120 583 - -
Stsc242167g00003 738 Gene3D - 600 731 - -
Stsc242167g00003 738 FunFam Subtilisin-like protease SBT5.3 25 116 - -
Stsc242167g00003 738 Pfam Peptidase inhibitor I9 37 115 IPR010259 -
Stsc242167g00003 738 MobiDBLite consensus disorder prediction 447 471 - -
Stsc242167g00003 738 SUPERFAMILY Subtilisin-like 120 584 IPR036852 GO:0004252|GO:0006508
Stsc242167g00003 738 ProSitePatterns Serine proteases, subtilase family, serine active site. 521 531 IPR023828 -
Stsc242167g00003 738 CDD Peptidases_S8_3 113 557 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242167g00003 Stsc-Chr242167 18851 21067 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242167g00003 29 728 Subtilisin-like Serine Gene Family AT5G59100 50.698 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242167g00003 - - qsa:O6P43_020998 808.135