Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242156g00004 ATGGGAAGAGCCTTACTCTCTGCTTTCCTTCATGATTTGTTGGACAACCTTCTTCTCTACCTCACTTCTCAAACCAAATCACATAGATATCTGCGCAAGCTCAAGGATAAGTTGGTGACACTTGATGGTCTTGTTGATGATGCAGAACAGATGCAGTTTTCTGAAGGAGAAAAAGCTCAACAAGTGAAGGTGTGGCTGAATGAACTGCAGCATGTTGTTTACCATTTGGAGGAGCTTCTACGGCAATGGCAGCAGGTCAACGCAACCACCACTATCAAGGCTTTGCTTCTGCAACTGAAAGTCTTCTCAACAGCAAAGAGGCCAGACATGGATATCAAGGTTCAAATCCGTGACACCCTCGAGAGCTTGGAAGCTCTTGTGAGAAAGAAGAACGATCTTGGTCTAACTGGGAGTGCTACAACTTTGAGGGAGTCTCTGCAGGGATTGCCTTCATCTTCTGATGTGGTGCATTCTTATTTTTATGGAAAATATCCCAAAGATTGTTTCTATGGAAGAGATGAAGAAGAGATGTCTATATTGGAAATCATGTTATCAAACAGTGAAATTGAAAGTGAAAGTAAAGAATATATCAAGGTGATCAACATAGTGGGAAAATCCGGCGCAGGAAAAACTGCTTTGGCTGATGTTATCTACTTCAACCACGACGTGAGGGAGTCTTTTGAGCCTAGAGCTCGGGTCTCTATGCCCTCAGAAGCCAACTTCAAAGTCATGGCAAAGAAGATACTAGAGGCAGTCACAGAGCAGTTTTGTCCTGATAATGATTTCAGTGTGTTGAGGAAGAGATTGAAGAGAACCTTTGCTGGGAAGAAATTTCTACTAATGTTGGATGACATCAAGATTGAAGATAGCTTATATGACTGGAACATGTTGATTGAGTCCTTGGAATCTGCAGCAAGAGGAAGTGTCATAATCCTAATATCCACTCCCTGTGATGATCCAAACCTGTTTCTGCCACCTGCTACTCGTACCGTGCATCTTGATTCGCTGTCAGCGGAGAGTGCCTGGGAAATCTTTTTGGGGCATGCTTCTTCTGGGCAGATGGATGTTACAGAACATGAGGAACTTGCAGCTGCTTGCAAAGAGATTGTTAACAAATTGGGAAACCTTCCTTTGGCTGCAAAAATGATAGGGAGCCTCTTCCAAGATAAGCTACATCTGGATCAATGGTTTGAGATACTGAGGAGCAAATTTCTGCATGCAGGTGAAGTGAATATCCCTATTCCTTCCTTCCTAGTACTCTGCTACCTTGATCTCCCAGCACAGATTAAACGGTGCTTTGCTTATTTGTCCTTGTTTCCAAAGGGCTACCAATTCAAGAAGAATGAGGTGGTCTTGTTATGGATGGCTGAAGGCTTTCTAAAGGAAACCAATGGAAAAAGCATGGAAGACATTGGTGATGAGTACTTTGGTTATCTAATCATGAGGTCTTTCTTAGAGCCTTATGGTTCTGGTGTTAGTTTTTTTACAATGCATAATTTGGTTCATGACTTGGCTACCTATGTGTTTGGAGAATCATACAAGCACCATTTGTCCTACTCAGGAAACACTCGGGATTTCGGATTGTCATTTCTTCTCAAACATGTAAAATCTTTGAGAACCATCTTGCCTATATCATTGCAATTTGAACGCGCTCCTAGGCGTGTCGACCTGATGCTTAAGGTTATGATGTTGAATCCAGATGTTCTTCGGGTTTTCTCTTTATCACACTATGGTATCACTAATTTGCCTGCTTCAATTGGAAAACACATTCATCTGTGTTACCTTGACCTTTCTAACACTGCACTGCAGACACTACCAGATTCCATTTGTGATCTGCATAATTTGCAGACACTATTGTTGACAAACTGCACTGAACTCACAAGTTTACCTCAGAGAATATGTGATTTGATAAACTTGCGTTACCTTGATATCAGAGGTAGCAGTGTGCAAGAGATGCCTTGGGAAATGCATAAATTGACAAGTCTGAGAACACTGAGAGACTTCATTGTTTCCAACAATGGTCCAAGATTAAGAGACTTGGCAGGGCTCTCCAATCTCAAAACACTGTCTATTTCAAAGTTGCAAAATGTGCATAGTGCTGAGGATGCTTCAGATTGTAAACTGATAGAGATGAGGAGCCTTGATAACCTTATTCTTCAATGGGACAATGGCATTGATGGCTATGAGGAGGATGAAATAGAAGTGCTTGAGGATCTAAAACCGCACAAAGACTTGAAAAGACTAAGAATCGAATACTACAGTGGTGCACGATTTGCAAACTGGTTGGGGGATCCTTCTTACCAGGCTTTACAGTCAGTAACTCTCCGCCATTGTGGAAATTGCACTTCTTTGCCAACACTAGGCCTGCTGCCATTGCTTAAAGACCTCTTCATTGAAGGGTTCACCAAAGTAAGTTCCATAGGCCTTGAATTTTATGGAGAGATTACTGCTTCACAGATGCCATTTCAATCTTTGGAGAGTTTACAGTTTTGTGATATGTTGGAATGGAAAAAATGGAACATACCAGAAGGTATTGAGTTTCCATGTCTCAATAAGCTATGTATAATACACTGTCCCAAGCTAGTGAAAGGTTTGCCTAAGCAACTTGATTCTTTAAAGAAGTTGGAGATCTTCAGATGCTATGACCTTGTGGCTTCACTTCCAAAAGTTCCCAACACATGTGAATTGTTGGTACAAGAAAGCAATGAAACTCTGATGAGAAATGCTGCTAAAAGCCCCTCACAAGCATCTTCGCGACGGGTTTCGATCTCAGAAGAACTTGACATCACCCGAAAATCCTATTCTCGTTTTCTAGACAGTCACATTGTAAGTGAGATTGAAGAAACTCCTCATGAGGCAAGGATGGAAACTGATTCCGCAGGAAGCAGATCATCATCACTTGATTCTTCATCTTCATATACACCACAAGGGTCTCCAATTTCTACTGCTGATATTCCACTCACTGCACAAGAAGCTGTCCTTCCTCTTACTGATGCCACTACCACTGTCAGGGAAGATACATTTTCTAAAGAAGATTTAGAGGATCCAAGATCATCCTTTGAGATACTCAAGGTTTCAACGGTGTCTCAATTGAAGTCATTGCCACAAAATTTGCACACTCTAAAACTTGAAGGGTGTGAATCCTTAGAGGCCCTTCCTGATGATTTACTGGGAAGAATAAGTACTCTTAGGGAGTTGTATCTGGTAAGTTGTTCTTCTCTTAGATCCCTACCTTCCCTTGGTTCTGTGGCAACACTTTACATACGTAACTGCAGGAAATTGGAAGATCTATCATCTTTAGAATCAAGAAAGCAGGTTGACTTTCTCCAACACTTGTTCATAGGGAGTAGCTGTGATTCTCTCACAACCTTGAACTTAGATTTGTTCCCCAAACTCAAAATTCTCTGTCTATGGGATTGTCCCAATCTTGAGTCAGTTAGTTCTAACAGAGAGTTCAAAGATGATCTTGCGTCACTTGAGTCTCTTGAGGTTAGAGATTGCCCAAGACTGATGTCTTTCCCAGAAGGAGGACTACATGCTCCAAATCTAGAATCTATATTCCTCTCAAATTGCAAGAGTCTTAACAAATTGCCTGATGCTATGAACTCTCTCACATCCCTCAAGACATTGTTTTTACACAGATGTCCAGAAATTGAATCTCTCCCACTTGGGGGTCTGCCTTTGAGTTTAATTCTACTCTCTATATCTTATTGCGATAAACTTACGCCACAAAAGAGTTGGAGGTTAGATACTCTTGAGTCTCTTAACCGTTTGGAGCTTGAAGGTGGATGCATGGACATGGATTCATTTCCAGAGGACAAGCTGCTTCCTCCCAATATAAACTCCATACGCATAAGCACAATGAAGAGTCTGAAGAAGCTAGACTACAAGGGGTTTCAGCACCTGAATGCTCTTCATACACTTGAAATTCATTGCTGTGACATGCTTGGTTCCTTTCCTGATGGAGGGCTTCCTTCCTCCCTAAATCAACTTTGTGTTGAAGAATGCTCATTGCTGACTCCAAGGCTTAAACCCAAGAGAGGGAAGGAATGGCACAAGGTAGCTCGAATCCCACACATACAGATCAATCACCAGACTATTGAGGGGAACAGAGGTCTACAAAAGGTTGGTCTTGAATACTGTGGGAATGGAATTGAGCCATTCAAATCCTTGCAAGTAATGAAGTTCGAGGACATGCCGAACTGGGAAGTGTGGTCAGCAAGCAATCTTGAACATCGCCCTGGATTCCCTTTGCTTCAAGAAGACAAGAACTTAATATAA 4281 0.4179 MGRALLSAFLHDLLDNLLLYLTSQTKSHRYLRKLKDKLVTLDGLVDDAEQMQFSEGEKAQQVKVWLNELQHVVYHLEELLRQWQQVNATTTIKALLLQLKVFSTAKRPDMDIKVQIRDTLESLEALVRKKNDLGLTGSATTLRESLQGLPSSSDVVHSYFYGKYPKDCFYGRDEEEMSILEIMLSNSEIESESKEYIKVINIVGKSGAGKTALADVIYFNHDVRESFEPRARVSMPSEANFKVMAKKILEAVTEQFCPDNDFSVLRKRLKRTFAGKKFLLMLDDIKIEDSLYDWNMLIESLESAARGSVIILISTPCDDPNLFLPPATRTVHLDSLSAESAWEIFLGHASSGQMDVTEHEELAAACKEIVNKLGNLPLAAKMIGSLFQDKLHLDQWFEILRSKFLHAGEVNIPIPSFLVLCYLDLPAQIKRCFAYLSLFPKGYQFKKNEVVLLWMAEGFLKETNGKSMEDIGDEYFGYLIMRSFLEPYGSGVSFFTMHNLVHDLATYVFGESYKHHLSYSGNTRDFGLSFLLKHVKSLRTILPISLQFERAPRRVDLMLKVMMLNPDVLRVFSLSHYGITNLPASIGKHIHLCYLDLSNTALQTLPDSICDLHNLQTLLLTNCTELTSLPQRICDLINLRYLDIRGSSVQEMPWEMHKLTSLRTLRDFIVSNNGPRLRDLAGLSNLKTLSISKLQNVHSAEDASDCKLIEMRSLDNLILQWDNGIDGYEEDEIEVLEDLKPHKDLKRLRIEYYSGARFANWLGDPSYQALQSVTLRHCGNCTSLPTLGLLPLLKDLFIEGFTKVSSIGLEFYGEITASQMPFQSLESLQFCDMLEWKKWNIPEGIEFPCLNKLCIIHCPKLVKGLPKQLDSLKKLEIFRCYDLVASLPKVPNTCELLVQESNETLMRNAAKSPSQASSRRVSISEELDITRKSYSRFLDSHIVSEIEETPHEARMETDSAGSRSSSLDSSSSYTPQGSPISTADIPLTAQEAVLPLTDATTTVREDTFSKEDLEDPRSSFEILKVSTVSQLKSLPQNLHTLKLEGCESLEALPDDLLGRISTLRELYLVSCSSLRSLPSLGSVATLYIRNCRKLEDLSSLESRKQVDFLQHLFIGSSCDSLTTLNLDLFPKLKILCLWDCPNLESVSSNREFKDDLASLESLEVRDCPRLMSFPEGGLHAPNLESIFLSNCKSLNKLPDAMNSLTSLKTLFLHRCPEIESLPLGGLPLSLILLSISYCDKLTPQKSWRLDTLESLNRLELEGGCMDMDSFPEDKLLPPNINSIRISTMKSLKKLDYKGFQHLNALHTLEIHCCDMLGSFPDGGLPSSLNQLCVEECSLLTPRLKPKRGKEWHKVARIPHIQINHQTIEGNRGLQKVGLEYCGNGIEPFKSLQVMKFEDMPNWEVWSASNLEHRPGFPLLQEDKNLI 1426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242156g00004 1426 Gene3D Ribonuclease Inhibitor 531 917 IPR032675 -
Stsc242156g00004 1426 PRINTS Disease resistance protein signature 199 214 - -
Stsc242156g00004 1426 PRINTS Disease resistance protein signature 373 387 - -
Stsc242156g00004 1426 PRINTS Disease resistance protein signature 610 626 - -
Stsc242156g00004 1426 PRINTS Disease resistance protein signature 272 286 - -
Stsc242156g00004 1426 FunFam Probable disease resistance protein At1g63360 422 507 - -
Stsc242156g00004 1426 Gene3D Ribonuclease Inhibitor 1244 1413 IPR032675 -
Stsc242156g00004 1426 SUPERFAMILY L domain-like 1033 1336 - -
Stsc242156g00004 1426 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 1022 1240 - -
Stsc242156g00004 1426 Gene3D - 418 507 IPR036388 -
Stsc242156g00004 1426 Pfam NB-ARC domain 197 399 IPR002182 GO:0043531
Stsc242156g00004 1426 Gene3D - 335 410 IPR042197 -
Stsc242156g00004 1426 MobiDBLite consensus disorder prediction 959 982 - -
Stsc242156g00004 1426 Gene3D - 7 105 - -
Stsc242156g00004 1426 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 436 IPR027417 -
Stsc242156g00004 1426 SUPERFAMILY L domain-like 497 881 - -
Stsc242156g00004 1426 Coils Coil 31 51 - -
Stsc242156g00004 1426 Gene3D - 159 317 IPR027417 -
Stsc242156g00004 1426 Pfam Rx N-terminal domain 6 84 IPR041118 -
Stsc242156g00004 1426 Gene3D Ribonuclease Inhibitor 1017 1106 IPR032675 -
Stsc242156g00004 1426 Gene3D Ribonuclease Inhibitor 1107 1243 IPR032675 -
Stsc242156g00004 1426 MobiDBLite consensus disorder prediction 945 982 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242156g00004 Stsc-Chr242156 32728 37463 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242156g00004 564 665 WRKY Transcription Factor Family AT4G12020 33.010 4.74e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242156g00004 - - aip:107629658 1724.52