Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242145g00002 ATGGTTGATCAGGCTCACCACCCAACAATCATGGAGAAGGTTGCTGGACAGCTCCATCTCCGCTCCAATGCTTCATCCAACATCAGGAGCTACAACGGAGCCTTCCCCCAGCGTGCTTTGTACCAAAGGCGTGCATTTGGGGGTTACACAAATGCAGGATTGCAGTACCCGGTGATGCCAGCATGTGGTGCTACCTCTGATTTGTCTGCCGTTACAGCAACAACCTCCCCTGTCTTTGTTGCAGCTCCGGCAGAGAAAGGAAACTTCCTTGTCGACTTTCTCATGGGTGGTGTTTCTGCTGCTGTCTCTAAAACCGCTGCTGCTCCAATTGAAAGGGTTAAGCTCTTGATCCAGAATCAGGATGAGATGATCAAGACAGGAAGGCTCTCGGAGCCCTACAAGGGAATTGGTGACTGTTTTAAGAGAACTATTGCTGATGAGGGTGTAGGGTCCCTTTGGAGAGGTAACACTGCCAATGTCATCCGTTATTTCCCAACTCAGGCCTTAAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAACTTCAAGAAGGACAAGGATGGTTACTGGAAATGGTTTGCTGGAAACTTGGCCTCTGGAGGTGCTGCTGGGGCTTCATCCCTTTTGTTTGTTTACTCCCTGGACTATGCCCGTACTCGTCTTGCTAATGATGCAAAGGCTGCAAAGAAGGGTGGTGGAGATAGACAATTCAATGGCCTTGTTGATGTCTACAGGAAGACTTTGGCTTCTGATGGTATTGCTGGGCTTTACCGTGGTTTCAACATCTCCTGTGTTGGAATTATTGTGTACCGTGGTCTCTACTTTGGAATGTATGATTCCCTGAAACCAGTTCTTCTCACTGGAAGTCTGCAGGATAGCTTCTTCGCTAGCTTTGCTCTTGGATGGCTCATCACCAATGGTGCTGGTCTTGCATCATACCCAATTGACACTGTCAGAAGAAGAATGATGATGACATCCGGCGAGGCTGTGAAGTACAAGAGCTCCTTGGATGCATTCTCGCAAATCGTCAAGAATGAGGGTATGAAGTCCTTGTTCAAGGGAGCTGGTGCTAACATCCTTCGTGCTGTTGCAGGTGCTGGTGTGCTTGCCGGTTACGACAAGCTTCAGGTTATTGTGTTCGGCAAGAAGTACGGTTCCGGTGGCGCTTAA 1173 0.4859 MVDQAHHPTIMEKVAGQLHLRSNASSNIRSYNGAFPQRALYQRRAFGGYTNAGLQYPVMPACGATSDLSAVTATTSPVFVAAPAEKGNFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKTGRLSEPYKGIGDCFKRTIADEGVGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGDRQFNGLVDVYRKTLASDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQIVKNEGMKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242145g00002 390 PRINTS Adenine nucleotide translocator signature 192 205 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc242145g00002 390 PRINTS Adenine nucleotide translocator signature 166 178 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc242145g00002 390 PRINTS Adenine nucleotide translocator signature 89 101 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc242145g00002 390 PRINTS Adenine nucleotide translocator signature 298 314 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc242145g00002 390 PRINTS Adenine nucleotide translocator signature 133 154 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc242145g00002 390 FunFam ADP,ATP carrier protein, mitochondrial 90 386 - -
Stsc242145g00002 390 ProSiteProfiles Solute carrier (Solcar) repeat profile. 293 379 IPR018108 -
Stsc242145g00002 390 Gene3D Mitochondrial carrier domain 90 386 IPR023395 -
Stsc242145g00002 390 PRINTS Mitochondrial carrier protein signature 92 105 IPR002067 GO:0055085
Stsc242145g00002 390 PRINTS Mitochondrial carrier protein signature 258 276 IPR002067 GO:0055085
Stsc242145g00002 390 PRINTS Mitochondrial carrier protein signature 105 119 IPR002067 GO:0055085
Stsc242145g00002 390 PRINTS Mitochondrial carrier protein signature 302 324 IPR002067 GO:0055085
Stsc242145g00002 390 PRINTS Mitochondrial carrier protein signature 207 225 IPR002067 GO:0055085
Stsc242145g00002 390 PRINTS Mitochondrial carrier protein signature 155 175 IPR002067 GO:0055085
Stsc242145g00002 390 SUPERFAMILY Mitochondrial carrier 87 375 IPR023395 -
Stsc242145g00002 390 ProSiteProfiles Solute carrier (Solcar) repeat profile. 192 285 IPR018108 -
Stsc242145g00002 390 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 78 389 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc242145g00002 390 ProSiteProfiles Solute carrier (Solcar) repeat profile. 87 180 IPR018108 -
Stsc242145g00002 390 Pfam Mitochondrial carrier protein 88 184 IPR018108 -
Stsc242145g00002 390 Pfam Mitochondrial carrier protein 191 288 IPR018108 -
Stsc242145g00002 390 Pfam Mitochondrial carrier protein 294 379 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242145g00002 Stsc-Chr242145 7539 10969 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242145g00002 1 390 Antiporters AT5G13490 82.443 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242145g00002 K05863 - gmx:100789942 667.537