Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242144g00002 ATGACCCTTCTACTCCATAGTGGGTTCTTCTTTTTTCAATCACGTAATGCTCGCAGGTTTACGGTGGCCTCTTGCTCAGAGACGCTTAAGCTTCATTGGAGGTCAAAATTTCAACACTTTGATTACACGGCTGGAATAGGGCCAGCCCCAAGACCCCATTCAGCCCAAAATTTCAATGAGAAAAAAACCCTAATTCCCAAATTTCAAAGAGAAAAAAATCCAAATTCTCAAATTTCCCAAATTCACCGGAACCCTAGCTTATCATCTGCGGCCTCCACCGTCTGCATCCGCCTCCGCCTCCGAGCGTCCAATCGTTTCATCACGAAGCCATCGTCACGGCATCACCTAGCGTCCCAGCCACCATCACCTTCTTCCTCCGCCGCCTTCCCGTTCTTCCTCGGCCGCCGCATCTGCTTCTGCTGTTTATTGCTCACCAACGCTGTCGCCCGCCAGCCCCTTCTTGTCCAAACGCCGTCGCCCGCCAGCCCCTTCTTCTTGTCCAGACGCCGCCGCCGCTGCATCTGTCTCCTCCTCTTGCTACGCTGTCGCTGCATCTGTCTCACTGCTTTCACTTGCAAGAAATCTGCAACTGGGAATTGGTTACCTCAGGATTTGAACAAAGGGATTAGCCACCAAAAGGGTAACGATAACAGCAAGAAACGGAGGCTAACGAGCGAGCAAGTTCAGTTTTTGGAAAGAAGCTTCGAGGTGGAGAACAAGCTTGAACCAGAAAGAAAAGTGCAAGAAATTTTTACTGAGGTTGAGATGGATGAAGTGATCACCTTTGTGTATCACCATGGAGGCGCGCTTGTGACGAAGGATGATGGCGAAGTGGTGTACGAGCTGGGGGATATTACCGAACAAGCAAACGAGGAGGCCACTAAACCAAGGGCTGAGGTTTCTTGA 906 0.5044 MTLLLHSGFFFFQSRNARRFTVASCSETLKLHWRSKFQHFDYTAGIGPAPRPHSAQNFNEKKTLIPKFQREKNPNSQISQIHRNPSLSSAASTVCIRLRLRASNRFITKPSSRHHLASQPPSPSSSAAFPFFLGRRICFCCLLLTNAVARQPLLVQTPSPASPFFLSRRRRRCICLLLLLRCRCICLTAFTCKKSATGNWLPQDLNKGISHQKGNDNSKKRRLTSEQVQFLERSFEVENKLEPERKVQEIFTEVEMDEVITFVYHHGGALVTKDDGEVVYELGDITEQANEEATKPRAEVS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242144g00002 301 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 212 248 IPR045224 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242144g00002 Stsc-Chr242144 10941 15795 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242144g00002 219 248 Homeobox Transcription Factor Family AT3G01470 80.000 2.77e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242144g00002 - K09338 adu:107489132 66.6254