Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242135g00005 ATGCCTCATAGAGCAACTTACATTTTCCCTAGGCAATTCCCGGAGAGAGGGTTGGATGAGTCTGCGAGGCAGAGATTGGATCACGAGAAGAAGAGACTCGTCAACTCTATCAAATCACCTGATAATAATAATAATAACAATACTTTCGGCGCTGAAAGCGACATCGTGTCTACAACAACTGCAACTGACACACCTGTTACTACAGCTCCTCTCGCCAAAGACGACGTCGTCGTTTTTCCATCGGGGAAACACTCGGCTGTTTCTGACCTCTTCGCCGGTGCCGGCGTTTCCGGAGTAGGTAGGTTCAGGAGAAAGAGCAAGCAAATCGCCGCTTTCTGTGACTGGATCAACGATAAGAAGCGTGATTCTGGTAATCGATTGGATCATCGCCGCCGTCTCTTGACGGCGGCGGAGGAGGAGGAGCATGACGAGCACGAGATGTTGCTTCCTCCATTGGTGGCGACGGAGACTGTCAAAGATTCCAGCAGCAGCGGAGGCGTTGACCAGAGCTTCGATCGGCAGGTGTCGCTGCCGCGGTTGTCGAGTGGAAGCAGCTACGCCGGGAGCTTGTTCTCCGGAACGACGACGTTCGATGGCACGGCCACATTCTCCAGCGACATTAACACCAAAGATGAAACCTCTTCCTCCGAAGCAACAAGGAAGCACCACCACGATGAAGAAGAAGAGCAATATCACAACAACAACAACGATAACGGTTATGCTAGAAAGTACAGAGAAAGCTACTACCTCCAAGTCACGTTAGCGAAGAGTCTCACTTGCTTAGCAAGCCTCACCAACGAACCCGTTCTCATCACCGCAACCGAAACTTGGGATGCTGAATCCGTTTCTTATCGTTTATGGGTGAGTGGGTGCTTGTCGTACACGGATAAGATATCGGATGGTTTTTACAACATTCTTGGTATGAATCCGTACTTGTGGGTGATGTGCAATGAGAACGAAGAAGGGAAGAAGCTACCGACGCTGACTGCGCTGAAAGCAGTTGAGCCGAGCGAAACGTCAATGGAGGTTGTCGTCATTGATAGGAATCAAGACTCTCAGCTTAAGCAGCTTATGGAGAAAGCGCAGGAGCTGTATTGTGAATCCAAGAACTCATTGGTGCTGGTTGAGCAACTCAGCAAGTTAGTTGCCGTATGCATGGGGGGTACCTTTCCGGTGGAGCAAGGGGATCTACACAAGCGGTGGAAGATGGTTAGCAAGAGGTTGAGAAGTTTTCATCATTCGGTTGTGCTTCCTATTGGAAGCTTGTCTACTGGTCTTTGCAGGCATCGGGCCATTCTTTTTAAGAGATTGGCAGATTATATAGGTTTGCCATGTCGCATTGCTAAAGGATGTAGGTACTGTGCTTCAGATCATAGATCCTCTTGTCTTGTCAAGATTAAAGATGACAGGCAGCACTTAAGGGAATATGTTGTGGACCTAGTTGGAGAACCAGGAACTGTCCACGGGCCAGATTCCTCAATCAATGGAGCATATTTGTCATCCATTCCTTCTCCATTTCAAATTTCTCATTTAAAGGAATGCCAATCTCCATATTTGGCCAGTGAAGTATGTACCCAATCAGTAAATTCAAATCTTACAGGTTGTGTACAGGAAGGTCCTCAAGTAAAAGATACTAATTTGCTGAAAAATTATAAGAACTCCATTTTTGCTTCGGTTGATCAAAATTCTGGAGGTGTTTCTGAAAGTGTTCGCCCAGCCTCTGTAGCATCGCATGAATATTCTGGAATTGCTAAAGATAAGGTGGCAGCACAAGACATTTCTAACAATGAGATTATTATGAAGGAAAGTTCTGGAGCAAAAACCACTTCTAAGCAATCTATACATAGCACAACCAGCCAGTTAGCACAGGAGAAGGTAGGCAATAGACATGAGAACCAAGATGGTGCTGGAAATATTCCAAGATACGTGAATCTTGAACCATCACTTGCAATGGACTGGTTAGAGATCGCATGGGAAGATTTACGTATCAAAGAGCGTATTGGTGCTGGATCATTTGGGACAGTGTACCGAGCTGAATGGCATGGATCGGATGTTGCTGTCAAGGTTTTAACAGTTCAAGATTTTCATGATGATCAGTTGAAGGAGTTTTTAAGAGAGGTTGCAATAATGAAACGCGTTCGCCATCCAAATGTGGTGCTCTTCATGGGTGCAGTTACAAAACGTCCCCATCTGTCTATAATTACAGAGTATTTGCCTCGGGGTAGTCTATTCCGCCTGATACATAGGCCAGCATCCGGTGAAATTCTTGATCCGAGGAGACGACTACGGATGGCTTTAGATGTGGCTAAAGGGATAAATTATCTCCATTGTCTGAAGCCTCCAATAGTGCACTGGGATCTCAAATCTCCAAACCTGTTGGTGGACAGAAATTGGACAGTAAAGGTGTGTGATTTCGGATTATCCAGATTTAAGGCGAACACTTTCATATCATCAAAATCTGTTGCTGGGACAGTTGATCTTTCACTTCATGGTGCTTCAACTTCAATTAGCGTGTAA 2517 0.4581 MPHRATYIFPRQFPERGLDESARQRLDHEKKRLVNSIKSPDNNNNNNTFGAESDIVSTTTATDTPVTTAPLAKDDVVVFPSGKHSAVSDLFAGAGVSGVGRFRRKSKQIAAFCDWINDKKRDSGNRLDHRRRLLTAAEEEEHDEHEMLLPPLVATETVKDSSSSGGVDQSFDRQVSLPRLSSGSSYAGSLFSGTTTFDGTATFSSDINTKDETSSSEATRKHHHDEEEEQYHNNNNDNGYARKYRESYYLQVTLAKSLTCLASLTNEPVLITATETWDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNENEEGKKLPTLTALKAVEPSETSMEVVVIDRNQDSQLKQLMEKAQELYCESKNSLVLVEQLSKLVAVCMGGTFPVEQGDLHKRWKMVSKRLRSFHHSVVLPIGSLSTGLCRHRAILFKRLADYIGLPCRIAKGCRYCASDHRSSCLVKIKDDRQHLREYVVDLVGEPGTVHGPDSSINGAYLSSIPSPFQISHLKECQSPYLASEVCTQSVNSNLTGCVQEGPQVKDTNLLKNYKNSIFASVDQNSGGVSESVRPASVASHEYSGIAKDKVAAQDISNNEIIMKESSGAKTTSKQSIHSTTSQLAQEKVGNRHENQDGAGNIPRYVNLEPSLAMDWLEIAWEDLRIKERIGAGSFGTVYRAEWHGSDVAVKVLTVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIITEYLPRGSLFRLIHRPASGEILDPRRRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDRNWTVKVCDFGLSRFKANTFISSKSVAGTVDLSLHGASTSISV 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242135g00005 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Stsc242135g00005 838 SMART serkin_6 661 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc242135g00005 838 ProSitePatterns Protein kinases ATP-binding region signature. 667 688 IPR017441 GO:0005524
Stsc242135g00005 838 SUPERFAMILY Protein kinase-like (PK-like) 642 824 IPR011009 -
Stsc242135g00005 838 CDD STKc_MAP3K-like 667 825 - -
Stsc242135g00005 838 ProSiteProfiles Protein kinase domain profile. 661 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc242135g00005 838 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 203 824 - -
Stsc242135g00005 838 FunFam Serine/threonine-protein kinase isoform 1 651 739 - -
Stsc242135g00005 838 Gene3D Transferase(Phosphotransferase) domain 1 740 828 - -
Stsc242135g00005 838 MobiDBLite consensus disorder prediction 604 626 - -
Stsc242135g00005 838 Gene3D Phosphorylase Kinase; domain 1 654 738 - -
Stsc242135g00005 838 MobiDBLite consensus disorder prediction 213 233 - -
Stsc242135g00005 838 MobiDBLite consensus disorder prediction 604 639 - -
Stsc242135g00005 838 MobiDBLite consensus disorder prediction 202 239 - -
Stsc242135g00005 838 Pfam Ethylene-responsive protein kinase Le-CTR1 279 487 - -
Stsc242135g00005 838 Pfam Protein tyrosine and serine/threonine kinase 661 812 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242135g00005 Stsc-Chr242135 28977 35565 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242135g00005 1 824 MAP Kinase Kinase Kinase AT4G24480 53.187 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Stsc242135g00005 EDR1 5.4e-78 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242135g00005 - - gmx:100786546 1093.95