Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242131g00004 ATGGCCTCAAATATGCAGGGTTCCCTCAACAACAACAACAAAGTAGTCCTTCATAACAACAACAATGATGTTGAGCAACAACCAGCAACATCACTTGAGATCATTGAAACCAAGAAGGAGAAAGAAGAAGACTTCTTTGACTACTCTAAAAGATCTCAATGGCTACGTGCTGCTGTTCTTGGAGCCAATGATGGATTGGTCTCAACAGCATCACTAATGATGGGTGTTGGAGCAGTGAAACAAGACATCAAAGCCATGATCCTCACTGGTTTTGCAGGCTTAGTTGCTGGTGCTTGCAGCATGGCCATAGGTGAGTTTGTTTCTGTGTACTCGCAGCTCGACATCGAAATCGCTCAAATCAAGAGGGACAAGGAAAGAGTAAACAACAACATCAACAATAATAACAATTCTGATGAAGAAGATGAAGAAGAAGAGAAGTTGCCAAACCCTTTGCAAGCAGCAGCAGCATCAGCTTTAGCATTTTCTGCTGGTGCAATGGTGCCATTGCTTTCAGCTTCTTTTATAAGGGAATATAAGGTGAGGCTTGGTGTGGTTGTGGCTGCTGTTACCTTTGCTTTGGTTCTGTTTGGTTGGTTAGGTGCTGTTCTTGGTAAGGCTCCTGTTTTGAAGTCTTCTTTAAGGGTTCTTCTTGGTGGTTGGATGGCCATGGCCATCACTTTTGCTCTTACCAAGTTGATAGGTTCAAGTGCTCTCTAG 717 0.4338 MASNMQGSLNNNNKVVLHNNNNDVEQQPATSLEIIETKKEKEEDFFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEIAQIKRDKERVNNNINNNNNSDEEDEEEEKLPNPLQAAAASALAFSAGAMVPLLSASFIREYKVRLGVVVAAVTFALVLFGWLGAVLGKAPVLKSSLRVLLGGWMAMAITFALTKLIGSSAL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242131g00004 238 MobiDBLite consensus disorder prediction 128 147 - -
Stsc242131g00004 238 Coils Coil 110 137 - -
Stsc242131g00004 238 Pfam VIT family 143 230 IPR008217 GO:0005384|GO:0030026
Stsc242131g00004 238 Pfam VIT family 55 134 IPR008217 GO:0005384|GO:0030026
Stsc242131g00004 238 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 36 233 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242131g00004 Stsc-Chr242131 18963 20172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242131g00004 17 238 Nodulin-like Gene Family AT3G43660 63.964 1.86e-99 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242131g00004 K22736 - gmx:100802179 307.375