Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242124g00007 ATGAGGCCATCACTACTCTTCTTGCAAAAGGTTCTTCTTTTTCAATTGCCTCAAGCAATCCTTTGGTGTTGTTCTTCCATAGTCATCATTGCCATCATCATATTCCAACATGTTTCAGCTGGAAATCTACCAAACAATGAAACTGTGCCAGCAGTGATTGTGTTTGGAGACTCTATAGTTGATTCCGGAAACAACAACTATATCAGTACTATTGTCAAGTGTGATTTCTCACCATACGGAAGAGATTTCGGTATCGGAAATAATCCAACCGGAAGATTTAGCAATGGTCTAATCCCGTCAGACATCATTGCTGCGAAATTCGGAGTCAAGAAACTTTTACCGCCTTATCTTGATCCGAATTTGAAACTCGAAGATCTTCTCACTGGTATAAGCTTTGCCTCGGGTGGTGCCGGATATGATCCTCTAACATCCAAATTAATGTCTGTGATATCATTAACAGAACAACTAAACATGTTCAAGGAGTACATAAACAAGATTAAGGAAGGAGTTGGAGAAAACAGAACATCAATGATAGTATCAAAGAGTATATACATAGTTTGCATAGGAAGTGATGACATTGCCAACACTTATGTTCAGACACCATTTAGGAAAATTCAGTATGATATTCCATCATACACAGATTTTATGGCTTCTGAAGCCTCAATTTTCTTGCAGGAACTTTATGAATTAGGAGCAAGAAGAATTGGAGTATTTGGTGTACCAGTTATAGGTTGTGTGCCCTCACAAAGAACAATTGGTGGAGGCATCCTTAGAGCATGTTCAGATTCTTCAAACCAAGCAGCAATTCTCTTTAACTCAAAGCTCTCCAACCAAATGGATGCACTTCAGATGAACTTTCCAGATGCTAGATTTGTCTATCTTGATTCCTACAATCCATTCCTTGACATGCTTCAAAACCCCACAAAATATGGTTTTGGAGAGGTAGAGAAAGGATGCTGTGGCACAGGGAACATAGAAGTGAGCATATTGTGCAACCGTTACAGCCTTAATACATGCTCCAACGACTCTGATTATATTTTCTGGGATAGTTATCATCCTACTGAGAAAGCTTATTTTGTCCTTAGTTCTTTGATTCTCGATAACAAGATCATGGACTTCTTTTGA 1125 0.3867 MRPSLLFLQKVLLFQLPQAILWCCSSIVIIAIIIFQHVSAGNLPNNETVPAVIVFGDSIVDSGNNNYISTIVKCDFSPYGRDFGIGNNPTGRFSNGLIPSDIIAAKFGVKKLLPPYLDPNLKLEDLLTGISFASGGAGYDPLTSKLMSVISLTEQLNMFKEYINKIKEGVGENRTSMIVSKSIYIVCIGSDDIANTYVQTPFRKIQYDIPSYTDFMASEASIFLQELYELGARRIGVFGVPVIGCVPSQRTIGGGILRACSDSSNQAAILFNSKLSNQMDALQMNFPDARFVYLDSYNPFLDMLQNPTKYGFGEVEKGCCGTGNIEVSILCNRYSLNTCSNDSDYIFWDSYHPTEKAYFVLSSLILDNKIMDFF 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242124g00007 374 CDD SGNH_plant_lipase_like 50 368 IPR035669 -
Stsc242124g00007 374 PANTHER GDSL ESTERASE/LIPASE EXL3 30 362 - -
Stsc242124g00007 374 Gene3D SGNH hydrolase 38 369 IPR036514 -
Stsc242124g00007 374 Pfam GDSL-like Lipase/Acylhydrolase 52 364 IPR001087 GO:0016788
Stsc242124g00007 374 SUPERFAMILY SGNH hydrolase 51 367 - -
Stsc242124g00007 374 FunFam GDSL esterase/lipase APG 41 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242124g00007 Stsc-Chr242124 37136 41147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242124g00007 24 368 Pollen Coat Proteome AT1G75910 38.506 3.21e-78 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242124g00007 - - ahf:112723705 671.774