Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242118g00001 ATGCCAAGTGTGGCTGTAAAGCTCTACAGCGTCTTCTTCAAGTTCCTCTTGAAGCACCGTTTACAGAACCGGATTCAGGCACCGCCCGATAACTCCGACGCATTTGGAGTCACCACCCGACCCGAAGAGTCAGTCGCCGCCGCCAATCCTTCTTTCACTGACGGCGTCGCCACCAAGGACATCCACATCGACCCCCTCACTTCCCTCTCTATCCGAATCTTCCTTCCCGAATCGGCACTAACCCCTCCCGAACCTCATTCCAACCCTAACCACAACAACGCTGCTCCCAAACCTAGGTCCGAACATGGATCTGCGTCGGTGCGCGATTCGAACTCACTCGCATCGCGCCGCAACAGCTATGGACCCTCCACTGCGATTCAAAGGCAGGAATCGATGCGGAGGAACCACGCCGGAAACGGCGTCGTTGAGGGTTTGAACTTGATGTCCAACGGCGTTTACCGGGGGTACTCGCCGGCGATGGATAATCGGCGGAAACTTCCGGTGATGCTGCAGTTCCACGGCGGCGGTTGGGTGAGCGGGAGTAATGATTCCGTTGCCAATGATATGTTCTGTCGGCGGATCGCGAAGCTCTGCGATGTGATCGTGGTAGCTGTTGGGTACAGGCTGGCACCGGAGAATCGGTATCCGGCGGCGTTTGAGGACGGGATGAAAGTGCTGACTTGGTTGGCCAAACAGGCGAATTTAGCAGAATGCAGTAAGTCGATGGGGGTTGGGAAGGTTGGTGGTGGAGGAGGTGGTGTTGTTGGCGGCGGTGCCGGTGGGATTGAGTTCAAGAAAGCAGATTCTCATAGGCATATAGTTGATTCATTTGGAGCTTCAGTTGTTGAGCCGTGGTTGGCTGCTCATGGAGATCCATCAAGGTGTATTCTTCTTGGCGCAAGTTGTGGTGCAAATATTGCAGATTATGTGGCTCGAAAAGCTGTGGAAGGAGGCAAACTTCTGGACCCAGTCAAGGTGGTAGCACAGGTCTTACTGTATCCATTTTTCGTTGGAAGTGTGCCCACACGTTCCGAAATAAAATTAGCAAACTCCTACTTTTATGACAAACCTATGTGTATGCTTGCGTGGAAACTTTTCCTACCAGAGGAAGAATTTGGTTTGGACCATCCAGCTGCTAATCCCCTAATCCCAGGCCGAGGTCCTCCTTTAAAGCTAATGCCTCCAACATTGACAGTGGTGGCAGAACATGACTGGATGAGAGATCGTGCAATTGCTTACTCAGAGGAACTCCGGAAGGTGAATGTTGATGCACCTGTGCTTGAATACAAGGATGCAGTGCATGAATTTGCGACACTTGACGTGCTTATTAAAAGCCCTCAGGCCCAAGTTTGTGCTGAGGACATTGCTATCTGGGTCAAGAAGTATATTTCACGTAGAGGTCACGAATTCTCTTATTGA 1419 0.5173 MPSVAVKLYSVFFKFLLKHRLQNRIQAPPDNSDAFGVTTRPEESVAAANPSFTDGVATKDIHIDPLTSLSIRIFLPESALTPPEPHSNPNHNNAAPKPRSEHGSASVRDSNSLASRRNSYGPSTAIQRQESMRRNHAGNGVVEGLNLMSNGVYRGYSPAMDNRRKLPVMLQFHGGGWVSGSNDSVANDMFCRRIAKLCDVIVVAVGYRLAPENRYPAAFEDGMKVLTWLAKQANLAECSKSMGVGKVGGGGGGVVGGGAGGIEFKKADSHRHIVDSFGASVVEPWLAAHGDPSRCILLGASCGANIADYVARKAVEGGKLLDPVKVVAQVLLYPFFVGSVPTRSEIKLANSYFYDKPMCMLAWKLFLPEEEFGLDHPAANPLIPGRGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDVLIKSPQAQVCAEDIAIWVKKYISRRGHEFSY 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242118g00001 472 SUPERFAMILY alpha/beta-Hydrolases 153 444 IPR029058 -
Stsc242118g00001 472 MobiDBLite consensus disorder prediction 84 134 - -
Stsc242118g00001 472 MobiDBLite consensus disorder prediction 26 50 - -
Stsc242118g00001 472 PANTHER ARYLACETAMIDE DEACETYLASE 40 437 - -
Stsc242118g00001 472 Pfam alpha/beta hydrolase fold 169 437 IPR013094 GO:0016787
Stsc242118g00001 472 MobiDBLite consensus disorder prediction 79 134 - -
Stsc242118g00001 472 Gene3D alpha/beta hydrolase 36 469 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242118g00001 Stsc-Chr242118 5465 9431 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242118g00001 1 472 Carbohydrate Esterase AT3G27320 72.479 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242118g00001 - - adu:107494848 865.144