Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242079g00001 ATGAGACAGGTTATGGATATGCGTCAAGATCGTAATTGGATGTATAATAGATTTAAACCTGGTCGGAAGGGTTTAACTAGTGAAAAATTTATTTCCTTTGCTAAGAAATCAGCTGATTTATCAAATAAACAACTTGGCATTGTAGAGGTCTGCCATACAAGAGAATATTCAAGATATGATCCTTTCATATTTGCTCAAAATGCAATTCAAGTATTTTTTCGAGGTGATGTAGAGACTGTTATTCCACTAAAGCGGTACGGACCTGGTCGTCTACATCGTTCTTTTGAAGATCATATTAAGGATCTTCAAAGTAAGGCATCTGATGAACAAAATGCAGCTAATGAAACTCAAAGTAGTAAACGACAGGCAGAGATCAAACTTAGGGATCTAGAATCAAATCTGATATCTGTAAAGAGTAAACATGAATTTATTCCTCCAAATCATGTTCTTGCTCGAAAAAATTTTGAGAAGCGAGCTGCTTCTTTACTAAAGAACTTGCTAGCCAAAGCCCATACAAACTCATTAGGGAGCCTTCCAACACCGATGGAGTTATTCGAGCGCACCCACAAACACAAGGATGAATCATGGGTGGATAAGAAGTCAGAACATTTTAGTGCTGAATTTAACCATACTAAAGAAGAGGCTACTCAAAAGGCGGCTGAAGATGGAAGTAGCGCACGAGATGGGATAGATTTGTGGTGCGACATAGCTGGAGTTAAAAAGGGAAGAGTTTATGGATTTGGAATTGAGCCCACCATAATTGATAAGAGGTCTAGTTGTCATGATTCCAGTTCTCAATGGTTGCAAAGATCGGAACATGAAGAATTAGTAAATGATTTAGAAGAGGAGAATAGATGCTTGAAAACTAGACTAGAGAATGCAGAACATGCTATTGAAGAAAATAACAAATTGGTTCAAGAAATGATGAAGATGATGAAATTTCAAGTTGCAAATCCTCAAGTAGGGGGTGATGGTGGAAAGGCACATGAAGAATGA 996 0.3755 MRQVMDMRQDRNWMYNRFKPGRKGLTSEKFISFAKKSADLSNKQLGIVEVCHTREYSRYDPFIFAQNAIQVFFRGDVETVIPLKRYGPGRLHRSFEDHIKDLQSKASDEQNAANETQSSKRQAEIKLRDLESNLISVKSKHEFIPPNHVLARKNFEKRAASLLKNLLAKAHTNSLGSLPTPMELFERTHKHKDESWVDKKSEHFSAEFNHTKEEATQKAAEDGSSARDGIDLWCDIAGVKKGRVYGFGIEPTIIDKRSSCHDSSSQWLQRSEHEELVNDLEEENRCLKTRLENAEHAIEENNKLVQEMMKMMKFQVANPQVGGDGGKAHEE 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242079g00001 331 Pfam Plant transposase (Ptta/En/Spm family) 144 250 IPR004252 -
Stsc242079g00001 331 Coils Coil 99 140 - -
Stsc242079g00001 331 Coils Coil 270 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242079g00001 Stsc-Chr242079 1903 4712 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242079g00001 63 121 Structural Maintenance of Chromosomes family AT5G61460 42.373 2.41e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242079g00001 - - ahf:112756419 140.198