Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242073g00010 ATGGGTTTGGGAATGGGAATGGCAAATTTGAACAACAATGAGATATGGAAGGCGCATGCTGCCATGGCCATGGTTCAGCTCTTCTCCGGTGGCTATCACGTTATTACCAAATTAGCCCTCAACGTTGGCGTCAACCAGATCGTCTTCTGCGTCTTCCGCGATCTCCTCGCTCTCTCCATCCTCGCCCCTCTCGCCTTCTTTCGTGAAAAACGCACGCGACCTCCCATGACCAAGCACCTCTTGTTGTCCTTCTTCTTTCTTGGATTAACCGGGATATTTGGCAACCATCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCTGCTGCAATACAGCCAGCCACACCCGTCTTTACATTTCTATTTGCTGTTATGATGGGTACAGAAAGAGTGAACCTTTTAAGATATGAGGGTTTGGCCAAGCTTGGTGGAACTCTTGTCTGTGTTTTCGGTGCTATATTGATGGTTTTGTATCGGGGTCCGGCCGTCGTCGGATATGCTGAAATGGACTTTGTTTCACATAATGAAATCAGTGCTAAAGGTCAACCAGAGCCTTCTGGATGGTTGGTTTCTGGTTTAATGGATCTTGGACTCGACCATTTTCATCTTGGGGTTCTGTGTTTTATAGGGAACACCTTGTGCATGGCTGCTTTTCTTGCCATTCAGGCGCCAATACTAAAAAAATACCCTGCCAACCTAACGGTCATTGCGTTTTCATACTTCTTCGGAGCTCTACTAATGGTGATCACATCTATGTTCGTGAGTAGTGAGGCAACCGACTGGATTTTGACGCGGTCTGAGACACTTGCTGTTATTTATGCTGGTGTTATTGCATCGGCCCTTAACTATGGACTGATTACATGGTGCAACAAGATCTTGGGACCAGCAATGGTTGCCCTTTATAATCCACTTCAACCTGGTGCTTCTGCTCTCTTGTCTAGAATTTTCCTCGGAAGTCCAATTTATATGGGAAGCATTCTTGGAGGTTCTTTGATTATTACTGGTTTGTATGCTGTTACATGGGCATCATTTAGAGAAAGACAAGCATCAAGTGGAGTTCTTCCTCATCATCATCATCATGGATCTTGGGTCTCTGATGACAAGAGTTCATATCAGAGAGGTCTCATCCTCCCCAGCTTAACCCCAAAGCCTTCTGATTAA 1170 0.4487 MGLGMGMANLNNNEIWKAHAAMAMVQLFSGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPLAFFREKRTRPPMTKHLLLSFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAIQPATPVFTFLFAVMMGTERVNLLRYEGLAKLGGTLVCVFGAILMVLYRGPAVVGYAEMDFVSHNEISAKGQPEPSGWLVSGLMDLGLDHFHLGVLCFIGNTLCMAAFLAIQAPILKKYPANLTVIAFSYFFGALLMVITSMFVSSEATDWILTRSETLAVIYAGVIASALNYGLITWCNKILGPAMVALYNPLQPGASALLSRIFLGSPIYMGSILGGSLIITGLYAVTWASFRERQASSGVLPHHHHHGSWVSDDKSSYQRGLILPSLTPKPSD 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242073g00010 389 PANTHER WAT1-RELATED PROTEIN 20 350 IPR030184 GO:0016020|GO:0022857
Stsc242073g00010 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 349 - -
Stsc242073g00010 389 Pfam EamA-like transporter family 206 343 IPR000620 GO:0016020
Stsc242073g00010 389 Pfam EamA-like transporter family 22 142 IPR000620 GO:0016020
Stsc242073g00010 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242073g00010 Stsc-Chr242073 40466 43003 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242073g00010 101 354 Nodulin-like Gene Family AT5G45370 66.142 2.12e-119 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242073g00010 - - gmx:100809051 617.461