Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242073g00005 ATGACTGGGAGAAAGCTTACGACTATAGTGTTCTTCTTGGATGAAACTTTTGAAGAAATTACATATGATATGTCAACAACAGTTGCTGATGCTGTTGAGGAACTTGCAGGACTTATTAAACTGTCAACTTATTCAACCTTTAGTCTGTTTGAATGTCACAAGGTCGTAACCGGCTCCAAATCGTCCGACCCTGGGAATGAGGAGTACGTCGGCCTCGATGATAACAAATATATTGGGGATCTCTTGGCGGAATTTAAAGCAGCAAAGGACCGAAGTAAGGGAGAAATATTGCACTGCAAACTGATATTCAAGAAAAAGTTATTCCGTGAGTCAGATGAAGCAGTGACGGATCCGATGTTTGTGCAATTGTCTTATGTTCAGTTGCAGCATGATTACATTTTGGGCAATTATCCTATTGGGAAGGATGATGCTGCCCAGCTTTCTGCATTACAAATCTTGGCTGAGGTTGGATATCTTAGCTCACCTGAAGCATGCACTGACTGGAACTCACTTTTGGAGCGATTCCTTCCTCGACAAATTGCAATGACACGAGCAAAACGGGAATGGGAGATGGACATTCTTTCTCGTTATCATTCATTGGAGCATCTGAACAAAGATGATGCAAGACAACAATTTCTACGTATATTGAGAGCACTTCCTTATGGGAATTCTGTTTTCTTCAATGTTCGCAAGATTGATGACCCTATTGGACTCCTCCCTGGACGAATAATATTAGGAATTAACAAAAGAGGGATTCATTTTTTCCGCCCAGTTCCAAAGGAATATTTGCACTCAGCTGAGTTGAGAGACATAATGCAATTCGGAAGCAGCAACACGGCAGTATTTTTTAAAATGCGAGTTGCTGGTGTTCTTCACATATTCCAGTTTGAAACCAAGCAGGGGGAAGAGATTTGTGTAGCACTTCAAACACATATAAATGATGTAATGCTGCGCCGCTATTCAAAAGCACGATCTGCTGCTACTGGTTCTTTGAATGGGGATATTTCTAGTAATTTTAAGCCTCCTAACTTGGAGTTGTATGAGAAGCGTGTTAAAGACTTATCAAAGCTTGCTGAAGAATCTCAAAAAAATGTTGATCAATTGTTTCAAGAATTGCATGAAAAGCAAAAACAAGAAGAGACAATGAAAGAAGAACTGGAGGGCCTGAAAGAATCCTTAAATGCTGATCGGAAAAATCTCGAGGAAGTTTCAAATGATCGGGATAGGCTTAGATCATTATGCAGTGAAAAAGACAAGGCACTTCAGGCTGCAATTCTTGAGAAAAGGAACATGGAAGCAAAGATGACCAAATTGAATAATCTAGTAATAGAGAATGCTGCCAAAAAGGAACTCATTGGAACAAATAACCAAGTCTCACAAAAGCTTGAAAGTGAACTTAAACTTTGTAAAGAGGAGTTGCAAGCTGCTGAAGAAACTATCAAAAGCTTAACAGATGAAAAGATGATTTTGGAAGAGAAACTATCTGTGCTCGAGAAGAGAAATGCTGAAGAGATTACTTCTCTTCAACGGAAACTTGAGCAAGAACGCAAACTTGTAAAGTCTCAAGTTTATGAGCTTGAAAAGAAGCTAGAGACTGTTAGACAAGAATTAGTGGTAGCAAAGTCTAATATTTCAGTAAAGGATTCTGAGTTGGCTGTTTTGCAAAACAATTTAAAGGAATTAGAAGAGTTGAGAGAAATGAAAGAGATGCAAGGGGCTCAACTAGTTGAAATGGAGGCACTTTATAAGGAAGAACAAGTTTTAAGAAAACGTTATTATAATACAATAGAAGATATGAAAGGCAAGATTAGAGTTTACTGTCGACTAAGACCTCTTAGCGAGAAGGAGATTGCCGAGAAAGAAAGACAAGCGCTTGCTGTGGTGGATGAGTTTTCAGTTGAACATATGTGGAAAGAAGATAAGCCGAAGCAGTACGTATATGATCGTGTGTTTGATGGTGGTGCAAGTCAAGAAAGTGTATTTGAGGATACAAAGTATTTGGTACAATCTGCTGTGGATGGATATAATGTTTGCATATTTGCTTATGGTCAAACTGGCTCTGGAAAGACATTTACCATCTATGGAAGTGAAAACAACCCTGGACTTACCCCTCGTGCGACTGCCGAACTTTTTAGAATTTTAAAGAGAGATAATAGCAAATATGCTTTTTCCTTAAAGGCATACATGGTGGAATTATATCAAGATACTCTCATAGATCTTTTGTTACCTAAGAATGCAAAACATTCAAAGTTGGACATCAAGAAAGACTCAACGGGTATGGTTGCTGTGGAAAATGTAACAGTTTTGCCAATCTCCAAAATAGAAGATTTGAATAATATAATCCAAAGAGGATCCGAGCGGCGGCACACTTCAGGGACGCAGATGAACGAAGAAAGTTCGAGATCTCATCTCATTCTATCAGTTGTCATTGAGAGCACCAACCTTCAAAGTCAAGCAGTTGCAAGGGGAAAGTTGAGTTTTGTAGATCTTGCTGGTTCAGAACGAGTGAAGAAGTCCGGTTCCGTAGGTAGCCAACTCAAGGAAGCTCAAAGCATTAATAAATCGTTGTCGGCACTTGGAGATGTGATTAGTGCTTTGTCTAATGGTGGTCAACACATTCCTTATAGGAATCACAAACTAACTATGTTAATGAGTGATTCCCTTGGTGGTAATGCTAAAACTCTCATGTTTGTGAATGTTTCTCCAGCGGCATCAAACTTGGACGAGACACATAACTCGCTTATGTATGCATCGCGAGTGAGGTCGATAGTGAATGACCCCAGCAAGAATGTTTCTTCGAAAGAGATAGCGCGACTGAAGAAGCTGGTTGCTTACTGGAAAGAACAAGCTGGTAGAAGGACTGAGGATGAAGAACTGGAAGAAATTCAAGAAGAAAGACCAATTAGAGATAGGGCAAGCTATTAG 2925 0.3952 MTGRKLTTIVFFLDETFEEITYDMSTTVADAVEELAGLIKLSTYSTFSLFECHKVVTGSKSSDPGNEEYVGLDDNKYIGDLLAEFKAAKDRSKGEILHCKLIFKKKLFRESDEAVTDPMFVQLSYVQLQHDYILGNYPIGKDDAAQLSALQILAEVGYLSSPEACTDWNSLLERFLPRQIAMTRAKREWEMDILSRYHSLEHLNKDDARQQFLRILRALPYGNSVFFNVRKIDDPIGLLPGRIILGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAATGSLNGDISSNFKPPNLELYEKRVKDLSKLAEESQKNVDQLFQELHEKQKQEETMKEELEGLKESLNADRKNLEEVSNDRDRLRSLCSEKDKALQAAILEKRNMEAKMTKLNNLVIENAAKKELIGTNNQVSQKLESELKLCKEELQAAEETIKSLTDEKMILEEKLSVLEKRNAEEITSLQRKLEQERKLVKSQVYELEKKLETVRQELVVAKSNISVKDSELAVLQNNLKELEELREMKEMQGAQLVEMEALYKEEQVLRKRYYNTIEDMKGKIRVYCRLRPLSEKEIAEKERQALAVVDEFSVEHMWKEDKPKQYVYDRVFDGGASQESVFEDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSENNPGLTPRATAELFRILKRDNSKYAFSLKAYMVELYQDTLIDLLLPKNAKHSKLDIKKDSTGMVAVENVTVLPISKIEDLNNIIQRGSERRHTSGTQMNEESSRSHLILSVVIESTNLQSQAVARGKLSFVDLAGSERVKKSGSVGSQLKEAQSINKSLSALGDVISALSNGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAASNLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKEQAGRRTEDEELEEIQEERPIRDRASY 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242073g00005 974 Pfam Kinesin motor domain 608 923 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc242073g00005 974 CDD FERM_C_KCBP 223 329 - -
Stsc242073g00005 974 Gene3D - 926 973 - -
Stsc242073g00005 974 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 224 332 - -
Stsc242073g00005 974 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 5 108 - -
Stsc242073g00005 974 ProSiteProfiles FERM domain profile. 6 320 IPR000299 GO:0005856
Stsc242073g00005 974 Gene3D Kinesin motor domain 546 924 IPR036961 -
Stsc242073g00005 974 CDD FERM_B-lobe 121 219 IPR019748 -
Stsc242073g00005 974 Gene3D - 224 331 IPR011993 -
Stsc242073g00005 974 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 602 950 IPR027417 -
Stsc242073g00005 974 PANTHER KINESIN-LIKE PROTEIN KLP-3 337 962 IPR027640 GO:0003777|GO:0007018
Stsc242073g00005 974 Coils Coil 421 441 - -
Stsc242073g00005 974 ProSitePatterns Kinesin motor domain signature. 823 834 IPR019821 GO:0003777|GO:0005524|GO:0007018
Stsc242073g00005 974 Gene3D - 118 219 IPR014352 -
Stsc242073g00005 974 Coils Coil 344 413 - -
Stsc242073g00005 974 PRINTS Kinesin heavy chain signature 674 695 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc242073g00005 974 PRINTS Kinesin heavy chain signature 793 810 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc242073g00005 974 PRINTS Kinesin heavy chain signature 873 894 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc242073g00005 974 PRINTS Kinesin heavy chain signature 824 842 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc242073g00005 974 SMART kinesin_4 600 931 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc242073g00005 974 ProSiteProfiles Kinesin motor domain profile. 602 923 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc242073g00005 974 FunFam Kinesin-like calmodulin binding protein 109 220 - -
Stsc242073g00005 974 MobiDBLite consensus disorder prediction 950 974 - -
Stsc242073g00005 974 SUPERFAMILY Second domain of FERM 104 221 IPR035963 -
Stsc242073g00005 974 Pfam FERM central domain 112 226 IPR019748 -
Stsc242073g00005 974 CDD KISc_C_terminal 600 925 - -
Stsc242073g00005 974 FunFam Kinesin-like calmodulin-binding protein 547 925 - -
Stsc242073g00005 974 SMART B41_5 2 226 IPR019749 -
Stsc242073g00005 974 SUPERFAMILY PH domain-like 226 314 - -
Stsc242073g00005 974 Coils Coil 459 500 - -
Stsc242073g00005 974 Gene3D - 5 109 - -
Stsc242073g00005 974 Coils Coil 509 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242073g00005 Stsc-Chr242073 19978 25679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242073g00005 1 972 Calmodulin-binding Proteins AT5G65930 73.124 0.0 1467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242073g00005 - - adu:107475586 1772.29