Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242057g00002 ATGATGGGGTTCTCCCGAGGAATCTTCACTGATAGAAACCACCAAGATTCTCACCTCAAGAACCTTAAAGTCAGAACCTTCTTGAGAAAACTGATATGGGACTTTGCGTTTGCATGTGTTGCTTCACCTTCTTGCACTTGTAGCAGCAGTGGCAAAACCCATGGCGAAGGATTCAAAAACATAACTTTGGATCACAAGAAGGCTCTGTTGCTGGCAGAGTCTAATGGGGTTGGAGAAGAATTAGTGAACAATGAGCCTCAATCGGTTCATTCATCTTTCAGGTTCAGCTTCCGTTCTCAGCTTGAGCTTGAATCCTTCAACATGACTTCTTCTTCTGCTGCTGCTGCTAAGGCTGCCTTGTTGGTGGTGAATTTGGAGTTTGAGTCTCTGAAATGGAAAACAATGGATCCATTGGAAAAGACAATATCCCCAGTGGCCAACACTTTGATCAGGTTCAATTATCATGAAATTGTGCATGCTACTCGAAATTTCTCCAAAGGTAGAGTGTTGGGAAGAGGGGCTTTGAGCTGTGTTTTTAGGGGAAAAGTTGGGATATTGAGAACATCTGTTGCAATCAAACGGTTGGACAAAGAAGACAAAGAGTGTAGCAAGGCCTTTTCCAGAGAGTTGATGATTGCTAGTTCTCTTCACAACACAAACATTGTTCCTCTTTTGGGATTCTGCATTGACTCAGAGGAAGGCTTGTTTTTGGTCTACAAATTTGTCTCAGGAGGAAGCTTAGACCATCACTTGCATGGGAGGAAGAGAACTAGTGGTTCACCACTTTCATGGTCTGTTAGATTTAAAGTTGCAATTGGGATTGCCAAGGCCATAGCTTATTTGCATTATGGAACTGAAAGATGTGTTGTTCATAGAGACATTAAGCCTTCAAATATTCTGCTTTCTTCTAAAAAGATTCCAAAGTTATGTGATTTTGGATTAGCTACATGGATAGTTGCACCTTCAGTACCTTTTCTGTGCAAAGCTGCCAAAGGAACATTTGGTTATTTGGCCCCTGAATATTTTCAACATGGAAAAGTGTCAGATAAGACTGATGTTTATGCTTTTGGAGTGGTTTTATTGGAACTCATAACTGGCAGGAAGCCAATTGAATCAAAGAGGACTCAAGGAGAAGAGAACTTGGTCTCATGGGCTAAACCTTTGCTACAGAAAGGGAAACTAGCTATTGAAAAGTTGCTTGATCCTCAACTCTGTCATAGCAGTTCGAGATTCTCGAGCCAAATAGCCCGGATGATCGAAGCTGCGGCTGCTTGTATTACATATGAAGAATCTAGAAGGCCCGGGATATACGAGATTCTTGCGATACTAAAAGGTGAACAAGAACCTGTTCTCTCTAGGAGGAGGAAGTCTGGTTATTACACACAGTTACAACAAAGTAATAGTGATTTGAATAGTCACTTGGCTTTGGCAATGATGGGGGTATCAGAGATTGACGATGATGATTATCTTTATTGCCGCTAA 1482 0.4157 MMGFSRGIFTDRNHQDSHLKNLKVRTFLRKLIWDFAFACVASPSCTCSSSGKTHGEGFKNITLDHKKALLLAESNGVGEELVNNEPQSVHSSFRFSFRSQLELESFNMTSSSAAAAKAALLVVNLEFESLKWKTMDPLEKTISPVANTLIRFNYHEIVHATRNFSKGRVLGRGALSCVFRGKVGILRTSVAIKRLDKEDKECSKAFSRELMIASSLHNTNIVPLLGFCIDSEEGLFLVYKFVSGGSLDHHLHGRKRTSGSPLSWSVRFKVAIGIAKAIAYLHYGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWIVAPSVPFLCKAAKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIESKRTQGEENLVSWAKPLLQKGKLAIEKLLDPQLCHSSSRFSSQIARMIEAAAACITYEESRRPGIYEILAILKGEQEPVLSRRRKSGYYTQLQQSNSDLNSHLALAMMGVSEIDDDDYLYCR 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242057g00002 493 PANTHER OS08G0249100 PROTEIN 119 476 IPR046958 -
Stsc242057g00002 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Stsc242057g00002 493 FunFam probable serine/threonine-protein kinase PBL7 126 241 - -
Stsc242057g00002 493 SUPERFAMILY Protein kinase-like (PK-like) 152 460 IPR011009 -
Stsc242057g00002 493 SMART serkin_6 164 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc242057g00002 493 Pfam Protein kinase domain 165 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc242057g00002 493 Gene3D Phosphorylase Kinase; domain 1 149 241 - -
Stsc242057g00002 493 ProSiteProfiles Protein kinase domain profile. 164 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc242057g00002 493 FunFam Putative receptor-like serine/threonine-protein kinase 242 459 - -
Stsc242057g00002 493 Gene3D Transferase(Phosphotransferase) domain 1 242 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242057g00002 Stsc-Chr242057 6739 10082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242057g00002 152 448 Trihelix Transcription Factor Family AT1G70460 41.391 1.88e-67 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Stsc242057g00002 Pkinase 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242057g00002 - - gmx:100786826 659.062