Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242056g00003 ATGGCACACTCATCACTTTCCTCCGCTGTAACGGGTCCCAAACTGGGGTTTTCTTACACTAGTCCATCTTGTATTTGGAAAACCAAGCCTAACCCCAGCAGGGTTACTTGTTCAGCTTCAGCACATAAGAGTAATCCATTAGCTGGTATCGGAATTGGGATTCTAGCATCTTCGGTGGTGGCCTTAACGCCCTTCAATGCTGACGCCACCAGAATCGAATACTACGCCACCACGGCTGAGCCCTTGTGCGAGTACAACTACGTTAAGTCCGGCCTCGGTTACTGTGACATTCTCGAGGGCTTCGGTGATGAGGCTCCCCTCGGCCAGCTCATCAATGTTCACTATACCGCAAGGTTCGGGGATGAGATAGTGTTTGATAGCAGCTACAAACGTGGTAGACCTCTCACCATGCGCATTGGTGTTGGAAAGGTGATTAAGGGGCTGGATCAGGGGATTTTAGGTGGGGAGGGAGTGCCTCCAATGAGGATAGGTGGGAAACGCAAACTGAAGATCCCTCCCATGTTAGCTTATGGCCCTGAACCTGCTGGGTGCTTCTCAGGTGACTGCAACATACCCGGCAATGCAACTCTTCTATATGACATTAATTTCGTTGGTCTTTATTCTGGTAATAGAAAGTGA 639 0.4961 MAHSSLSSAVTGPKLGFSYTSPSCIWKTKPNPSRVTCSASAHKSNPLAGIGIGILASSVVALTPFNADATRIEYYATTAEPLCEYNYVKSGLGYCDILEGFGDEAPLGQLINVHYTARFGDEIVFDSSYKRGRPLTMRIGVGKVIKGLDQGILGGEGVPPMRIGGKRKLKIPPMLAYGPEPAGCFSGDCNIPGNATLLYDINFVGLYSGNRK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242056g00003 212 SUPERFAMILY FKBP-like 85 205 - -
Stsc242056g00003 212 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 108 207 IPR001179 GO:0003755
Stsc242056g00003 212 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 104 202 IPR001179 GO:0003755
Stsc242056g00003 212 Gene3D - 81 206 IPR046357 GO:0003755
Stsc242056g00003 212 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 28 212 IPR044183 GO:0009507
Stsc242056g00003 212 FunFam Peptidylprolyl isomerase 80 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242056g00003 Stsc-Chr242056 13571 15270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242056g00003 84 208 Calmodulin-binding Proteins AT3G25230 37.008 6.19e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242056g00003 K01802 - gmx:100500547 320.087