Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242046g00012 ATGAAGTATTATGGGATGACAGAGCCGGGCAAGCATTTGGGGGTGGCCGGCCTCGGCGGCTTAGGCCACGTTGCCATCAAATTTGGCAAAGCATTTGGTCTCAAAGTTACTGTCATTAGTAGCTCTCCCAACAAGGAAGCTGAAGCTATTCACGTTCTAGGGGCTGATTCTTTCCTTCTTTCCTCTGACCCTGAAAAGATGAAGGCTGCTACCGGAACGATAGATTATATCATCGACACAATTTCTGCTGTTCATTCACTGGTTTCCCTGCTTGGTCTGCTGAAGCTGACCGGGAAGTTAGTCACCGTGGGGCTGCCTAGCAAGCCTCTTGAGCTGCCTATATTTCCCTTGGTTGCAGGAAGGAAGCTAATAGGGGGAAGCAAGTCTGGAGGGCTGAAGGAGACTCAGGAGATGCTTGATTTCTGTGGAAAGCACAACATAACTGCAAATATTGAGCTGATTAAAATGGATGAAATCAACACTGCTATAGAAAGGCTCAGCAAAGCTGATGTTAAGTATCGCTTTGTCATTGATGTTGCCAACTCCTTATCCTCCAGTAACATGTAG 567 0.4691 MKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISSSPNKEAEAIHVLGADSFLLSSDPEKMKAATGTIDYIIDTISAVHSLVSLLGLLKLTGKLVTVGLPSKPLELPIFPLVAGRKLIGGSKSGGLKETQEMLDFCGKHNITANIELIKMDEINTAIERLSKADVKYRFVIDVANSLSSSNM 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242046g00012 188 PANTHER ALDEHYDE REDUCTASE 1 182 IPR047109 GO:0016616
Stsc242046g00012 188 FunFam Cinnamyl alcohol dehydrogenase 1 149 - -
Stsc242046g00012 188 FunFam Putative cinnamyl alcohol dehydrogenase 6 150 179 - -
Stsc242046g00012 188 Gene3D - 129 175 - -
Stsc242046g00012 188 Pfam Zinc-binding dehydrogenase 20 141 IPR013149 -
Stsc242046g00012 188 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 147 IPR036291 -
Stsc242046g00012 188 Gene3D - 2 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242046g00012 Stsc-Chr242046 44927 46602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242046g00012 1 183 Monolignol Biosynthesis Gene Families AT2G21730 69.022 7.69e-81 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242046g00012 K00083 - gmx:100795575 282.337