Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242032g00006 ATGCTTTTAGACTGGATTGGATCCCTCCTCATGCTAATTGTGAACTGTGATGGCAGCTTATTGATTCATAATTTTTTACGTGGTTTTGGTTGTATTGTTCAAAATTCAGATGAAGTTGGATCATGGGTTGTTCCGACAATGTTTAGGCTATCACTAGCCTGCGGTTTTATTCAGCTTGATTCGAGTCCCTCCACTGTTGATTATGACCTAGTCTCTAAGATCAAGGACATTCTGTTATGGAATTGGTCAGTGCAGCTTTCTCTTATTCAGCAATTGGCTAATACATTATATGGCGTGTTCACATGTCTAGATATTGATGATGCTAACGGTGCTCATTTATTTGCAGAGCCCTCTTTTGCCTACCCCAACCTCTTAATCATGATCATTCCGGAGAAGAACCGCAAAGAGATCTGCAAATATCTCTTCCAAGAGGGAGTTTGCTATGCAAAGAAGGACTACAATCTGGCAAAGCACCCGGAGATTGAGGTGCCAAATCTACAGGTTATTAAGCTGATGCAGAGTTTCAAGTCGAAAGAGTATGTGAGGGAGACATTTGCTTGGATGCACTATTATTGGTTTCTCACCAATGATGGCATTGAGCATCTCAGAACTTACCTTAATCTTCCCTCGGAAATTGTTCCTGCTACTCTAAAGAAACAAGCAAAGGCTACAGGTCGTCCATTTGGTGGTCCACCTGGTGATCGCCCTAGGGGTCCACCACGCTTTGAAGGGGAGCGTAGGTTTGGTGACCGTGATGGATACCGTGGAGGTCCCCGTGGCCCTGGTGGTGATTTTGGAGGTGACAAGGGGGGTGCACCTGCAGACTACAGGCCTTCTTTTGGGGGTTCTGGTGGAAGACCTGGCTTTGGCCGAGGTTCTGGCAGTTTTGGTGGGCCGCCACCGTCTAGCTCAAACCTTTCATAA 924 0.4589 MLLDWIGSLLMLIVNCDGSLLIHNFLRGFGCIVQNSDEVGSWVVPTMFRLSLACGFIQLDSSPSTVDYDLVSKIKDILLWNWSVQLSLIQQLANTLYGVFTCLDIDDANGAHLFAEPSFAYPNLLIMIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEIEVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEHLRTYLNLPSEIVPATLKKQAKATGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGSGGRPGFGRGSGSFGGPPPSSSNLS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242032g00006 307 MobiDBLite consensus disorder prediction 220 307 - -
Stsc242032g00006 307 Pfam Plectin/S10 domain 129 220 IPR005326 -
Stsc242032g00006 307 MobiDBLite consensus disorder prediction 238 254 - -
Stsc242032g00006 307 PANTHER 40S RIBOSOMAL PROTEIN S10 127 299 IPR037447 -
Stsc242032g00006 307 FunFam 40S ribosomal protein S10 127 230 - -
Stsc242032g00006 307 Gene3D - 127 230 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242032g00006 Stsc-Chr242032 35427 39168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242032g00006 127 280 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 82.581 8.27e-72 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242032g00006 K02947 K09422 zju:107414743 211.075