Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242032g00004 ATGGCAACGAAAGAGTCAAGCTCTTCTGGTTCTGCAACAGGAGACGCTAAAATCAAGAGGGTGGTGACTCATGGAGGTAGATATGCACAGTACAATGTGTATGGGAACTTGTTCGAGGTGAGTTCCAAGTACGTCCCTCCCATTCGCCCTATTGGAAGAGGTGCTTATGGCATAATCTGTGCTGCTGTGAACTCAGAGACGCACGAACAAGTTGCCATCAAGAAGATTGGTAACGCGTTTGACAACATTATTGATGCTAGAAGGACACTCAGAGAAATCAAGCTCCTTCGTCACATGGATCATCAAAATATAATTGCGATAAAGGACATAATACGACCACCGAAAAGAGAGACGTTCAACGATGTATACATAGTTTATGAATTGATGGACACTGATCTTCATCACATCATTCATTCTGATCAACCACTCTCTGATGACCACTGTCAGTACTTCTTGTACCAGCTGTTACGAGGACTGAAATATGTGCATTCAGCAAATGTGTTGCACCGTGATCTGAAGCCAAGTAACCTGCTCATGAATGCCAACTGCGACCTCAAGATTGGTGACTTTGGATTGGCAAGGACTACTTCTGAGCAGGATTTCATGACAGAGTATGTTGTCACCAGATGGTACCGTGCCCCGGAGCTGCTCCTCAACTGTTCTGAGTACACCTCTGCCATTGATGTCTGGTCTGTTGGCTGCATTCTTGGTGAGATTATGACCCGTGAGCCCTTGTTCCCTGGCAAGGACTATGTTCATCAGCTTTGGCTCATTACTGAGTTGATAGGGTCACCTGATGATGCTAGCCTGGGGTTTCTCCGAAGTGACAATGCCAGAAGATATGTCAAACAGCTTCCACAGTTCCGCAAGCAAAAATTTTCTGCTAGGTTCCCCAATGTCATGCCTGAGGCACTTGATCTCCTTGAAAAGATGCTCATGTTTGATCCTAACAAGCGCATCACAGTTGATGAGGCACTGTGTCATCCATATCTAGCATCACTCCACAACATCAACAACGAGCCGGTTTGTCCGAGGCCATTCAGTTTTGACTTTGAGCATCCAACATGCACTGAAGAGGATGTCAAGGAGCTCATATGGAGGGAATCTGTCAAGTTCAATCCAGATCCACCTTCTCACTAA 1140 0.457 MATKESSSSGSATGDAKIKRVVTHGGRYAQYNVYGNLFEVSSKYVPPIRPIGRGAYGIICAAVNSETHEQVAIKKIGNAFDNIIDARRTLREIKLLRHMDHQNIIAIKDIIRPPKRETFNDVYIVYELMDTDLHHIIHSDQPLSDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLMNANCDLKIGDFGLARTTSEQDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCILGEIMTREPLFPGKDYVHQLWLITELIGSPDDASLGFLRSDNARRYVKQLPQFRKQKFSARFPNVMPEALDLLEKMLMFDPNKRITVDEALCHPYLASLHNINNEPVCPRPFSFDFEHPTCTEEDVKELIWRESVKFNPDPPSH 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242032g00004 379 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 43 333 - -
Stsc242032g00004 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Stsc242032g00004 379 Gene3D Phosphorylase Kinase; domain 1 28 368 - -
Stsc242032g00004 379 ProSiteProfiles Protein kinase domain profile. 45 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc242032g00004 379 ProSitePatterns Protein kinases ATP-binding region signature. 51 75 IPR017441 GO:0005524
Stsc242032g00004 379 Gene3D Transferase(Phosphotransferase) domain 1 129 358 - -
Stsc242032g00004 379 ProSitePatterns MAP kinase signature. 80 183 IPR003527 GO:0004707|GO:0005524|GO:0006468
Stsc242032g00004 379 SMART serkin_6 45 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc242032g00004 379 CDD STKc_TEY_MAPK 38 374 - -
Stsc242032g00004 379 SUPERFAMILY Protein kinase-like (PK-like) 48 337 IPR011009 -
Stsc242032g00004 379 FunFam Mitogen-activated protein kinase 129 358 - -
Stsc242032g00004 379 FunFam Mitogen-activated protein kinase 30 140 - -
Stsc242032g00004 379 Pfam Protein kinase domain 49 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242032g00004 Stsc-Chr242032 28577 30132 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242032g00004 7 374 MAP Kinase Gene Family AT4G01370 81.793 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Stsc242032g00004 Pkinase 8.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242032g00004 - - gmx:100807109 716.842