Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242030g00005 ATGGAACTCACCACCATGCTTTACTTGCTTGCTTCATCACTGTTCTTCATTGTTGTTTTCAAATTTTTGCCTTGTTCCAAGAAAGGGAGAGAATTGCCACTCCCTCCAGGCTCCATGGGTTGGCCTTACATCGGAGAAACCTTCCAAATGTACTCTCAAGACCCAAATGTCTTCTTTTCCACAAAACTCAAGAGGTATGGTTCTATATTCAAGTCCCACATTTTGGGATGTCCGTGTGTTATGATAGCAAGCTCAGAAGCTGCAAAATTTGTGCTAAACAAAGCACAATTGTTCAAGCCAACATTCCCAGCTAGCAAAGAGAGGATGTTGGGAAAGCAAGCCATATTCTTCCACCAAGGAGAATACCATGCCAACCTTAGGAGGCTGGTCCTCCGCACCGTCATGCCCGAAGCCATCAAGAACATCGTCACAGACATCGATTCCATTGCCATCGATGCCCTCCAATCCTGCCAAGGAAAACCTATCACCACTTTCCTCGAATTCAAAACCTACACATTCAACGTTGCGCTGCTTTCAATCTTCGGAAAAGACGAGGTTAAGTACAGAGAAGATTTGAAGAGGTGCTACTACACTTTAGAGAAAGGGTACAACTCAATGCCGATAAATGTTCCTGGAACACTGTTCCACAAGGCCATGAAGGCAAGAAAGGAAATCGCTGAGATAGTTGCGAGAATCATGGAAAGAAGGAGAGAAAAGAAACAAGAGAGTTACAATGATTTGCTGGGTTCGTTCATGGCTGAGAAAGCAGGACTCAGCGATGAACAAATAACAGATAACGTCATTGGTGTCATTTTCGCTGCTCGCGACACCACTGCTTCTGTGCTGACGTGGATCGTTAAATACCTCACTGACAATCCAACTGTACTGCAAGCTGTAACTGAAGAGCAGGAATGTATAGTGAAGAGGAAGGAAGAAAGTGGTGAAGAGATAGGACTGAATTGGGAGGATACAAGGAAGATGCCAATGACTTTAAGGGTCATTCAAGAGACTCTAAGGGTTGCTTCAATCTTGTCTTTCACTTTCAGAGAAGCAGTTCAAGATGTTGAGTATCAAGGGTATCTTATACCAAAGGGGTGGAAAGTATTACCACTTTTTAGAAACATACACCATAGTCCTGACAACTTCAAAGACCCAGAAAAGTTTGATCCTTCAAGATTTGAGGTAAAATTATTGTTTTGA 1200 0.43 MELTTMLYLLASSLFFIVVFKFLPCSKKGRELPLPPGSMGWPYIGETFQMYSQDPNVFFSTKLKRYGSIFKSHILGCPCVMIASSEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGEYHANLRRLVLRTVMPEAIKNIVTDIDSIAIDALQSCQGKPITTFLEFKTYTFNVALLSIFGKDEVKYREDLKRCYYTLEKGYNSMPINVPGTLFHKAMKARKEIAEIVARIMERRREKKQESYNDLLGSFMAEKAGLSDEQITDNVIGVIFAARDTTASVLTWIVKYLTDNPTVLQAVTEEQECIVKRKEESGEEIGLNWEDTRKMPMTLRVIQETLRVASILSFTFREAVQDVEYQGYLIPKGWKVLPLFRNIHHSPDNFKDPEKFDPSRFEVKLLF 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242030g00005 399 SUPERFAMILY Cytochrome P450 30 394 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242030g00005 399 Gene3D Cytochrome P450 25 396 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242030g00005 399 PANTHER CYTOCHROME P450 26 30 394 - -
Stsc242030g00005 399 Pfam Cytochrome P450 35 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242030g00005 399 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242030g00005 399 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242030g00005 399 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242030g00005 399 PRINTS E-class P450 group I signature 262 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc242030g00005 399 PRINTS E-class P450 group I signature 282 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242030g00005 Stsc-Chr242030 32167 34860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242030g00005 1 395 Cytochrome P450 AT5G45340 69.849 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242030g00005 K09843 - gmx:100170674 651.358