Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242028g00001 ATGATGACAGATTGGTTTTCAACTCCATTGGATCTGAATTCCATACACGAGGAATCTCAATTGGAAGAGCAAATGGAAGATTTGAATTCTATTGATGAGGTTGGGCAATTGGATGATCATTTTGAGGATCTGAATTCCATTAATGAGGTTCGGCAATTGGAAGATCAAACAGAGTTTCTGTGTAATGTTGATGAAGAGTATGTCCCCAAGGTTGGGATGACATTTAAGTCATGTACAGAAGCTACTGAATTCTACAAGGAGTATGCTAAACGAGCTGGATTTTCTTCCAAAATCAGAAATTCACAAAGAAATAAAGAGACTGGTGCAATCAAGAATCAACTCTTCACATGTAAGAGAGAGGGAAAAAGGAGATCTGACATTCCTGAGGCGGAAAAGACGAACCCCATGTCCCCGGCAAATTGTCCGGCAAGGATGTTCGTTCATATCGATAAGTTGACTCAGCGTTATGTTATTTCCAAAGTTGTGTTAGAGCATTCGCATCCTTGTTCTGCCGATCTTGCAGAGATGCTACCTCAACACAGAGAACTCAGCATGTACGTTCGTTACGTCATTGTGAACAACGATTAA 588 0.4048 MMTDWFSTPLDLNSIHEESQLEEQMEDLNSIDEVGQLDDHFEDLNSINEVRQLEDQTEFLCNVDEEYVPKVGMTFKSCTEATEFYKEYAKRAGFSSKIRNSQRNKETGAIKNQLFTCKREGKRRSDIPEAEKTNPMSPANCPARMFVHIDKLTQRYVISKVVLEHSHPCSADLAEMLPQHRELSMYVRYVIVNND 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242028g00001 195 Pfam FAR1 DNA-binding domain 83 169 IPR004330 -
Stsc242028g00001 195 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242028g00001 Stsc-Chr242028 3807 5010 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc242028g00001 FAR1 4.8e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242028g00001 - - aip:107614666 155.606