Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242026g00003 ATGTCATGCCCCCATGTTACTGCTATAGCCGCATATGTTAAGAGTTTTCACCCTGACTGGTCGCCGGCTGCTATAAAGTCTTCTATTATGACTACTGCAATGCCAATGAATAATAGTAATCAAGTTCTTAAGGATTTTGCTTATGGAGCAGGGCATGTGGATCCGTTGAAAGCCATCAACCCTGGGCTCATTTTGGATCTTTCTGAGGATGACTACGTGAATTTGTTATGTGACATAGGGTATGAAACTCCAACAGTGAGGAAAATAAGTGGTGATAATAGCACATGTCCTTCTTTAAGTGCAAGATCATTGCTCAAAGATATTAACTATCCTTCAATTATATATCAAATCCAACTAATGCAACCGTTTGTGGCCAATTTCACGAGAACAGTCACAAATGTTGGCTTTGCTAATTCAACCTACAAAGCAAGTGTCATGAAAGGTTCCAACATCAATATCAATGTCGTGCCTCAAGTTCTCTCATTCAGATCTCTTGGGGAAAAACAATCTATCAGTGTCAATATTGCTAGAGGAAAATTTTCTGAGCCAACTGTAATCTCCTCACCACTTATATGGACAGATGGGGAACATAGTATGAGGATTCCCATTATTATAGATGTCACCCAAACTTGA 633 0.3934 MSCPHVTAIAAYVKSFHPDWSPAAIKSSIMTTAMPMNNSNQVLKDFAYGAGHVDPLKAINPGLILDLSEDDYVNLLCDIGYETPTVRKISGDNSTCPSLSARSLLKDINYPSIIYQIQLMQPFVANFTRTVTNVGFANSTYKASVMKGSNININVVPQVLSFRSLGEKQSISVNIARGKFSEPTVISSPLIWTDGEHSMRIPIIIDVTQT 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242026g00003 210 Pfam Subtilase family 1 51 IPR000209 GO:0006508|GO:0008236
Stsc242026g00003 210 Pfam Fibronectin type-III domain 107 205 IPR041469 -
Stsc242026g00003 210 ProSiteProfiles Serine proteases, subtilase domain profile. 1 59 - -
Stsc242026g00003 210 Gene3D Peptidase S8/S53 domain 1 72 IPR036852 GO:0004252|GO:0006508
Stsc242026g00003 210 Gene3D - 76 208 - -
Stsc242026g00003 210 SUPERFAMILY Subtilisin-like 1 110 IPR036852 GO:0004252|GO:0006508
Stsc242026g00003 210 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 204 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242026g00003 Stsc-Chr242026 15028 15660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242026g00003 1 205 Subtilisin-like Serine Gene Family AT5G59100 49.282 3.67e-67 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242026g00003 - - ahf:112755745 263.848