Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242026g00002 ATGGGCAAGTTTTTGCGTTGCTTTGCAAATGAAGACCGACAGTTATATATTGTGTATATGGGGTCACTTCCAAAAAATGGAGACTACTCACCAACATCTCACCATTTAAGCATGTTACGCCAAGTTATGGGAAACGATTTTGCAGCACATTCCCTGTTCAGAAGTTACAACCGGAGCTTCAACGGATTTGCTGCAAAACTAACAGAACAAGAAGCGCATAATCTTGCTACAATGGATGCAGTAGTCTCTGTTTTCCCGAGCAAAACTTTGCAGCTTCATACAACAAGGTCTTGGGACTTCATGGGCTTCCAAGACACAAGGCAAATTAGTCCCGCAGAAAGCGATATCATAACTGGAGTCTTAGATTCTGGGATTTGGCCCGAATCGGATAGTTTTTCCGACCTTGGCTTTGGCCCGGTTCCAAAAAAGTGGGAAGGTACATGCGCCGGAGGGAGCAATTTTACTTGTAACAAGAAAGTGATTGGAGCGAGAAAATACAACGACGAAGTTGGATCATCCGCAAGAGACAATGTTGGTCATGGAAGCCATACAGCCTCAATAGCTGCTGGTAACAAAGTTAAAGATGCAAGCTTTTATGGGATTGCAAATGGAGCTGCAAAAGGAGGGGTATCATCTTCAAGATTAGCAGTCTACCAAGTTTGCATAACCGAGTCTTGCATGGAGGCTGCCATATTAGCAGCTTTTGATGATGCTATTGCTGACGGTGTAGATCTCATCACAATTTCGGTTGGTCGTGGAGTGGCGGTAGATATCAAGATAGATGTAATAGCAATTGGTTCTTTTCATGCAATGAAGAAAGGGATTCTAACTGTCCATTCATGTGGGAACAATGGTCCTGATAAAGAGACTACTAGTAGTGTAGCACCTTGGTTACTAAGTGTTGCAGCTAGCACCATGGATCGGAGAATCATCGACAAATTTTCCCTTGGAAATGGACAAATATTTTATGGGAGATCGATAAATAGTTTCGTATCAAGTGGGAAAAAGATACCTTTACTTCTCGGGGAGCATGCTTCGCTTCCAGGCTGCGATGGTGCAACCTGTGGTTGTCTTGATCCCAAGAAGGTAAAAGGAAAAATACTTTTATGCTCATCAGAAGAAGGAATTAAAATGGGTTATTATTATGGCGCATTTGGATCAATTGCGAATAGCTCTTTTCAAGAAGCCGTTGTTGTTCCTTACCCTACATCAATAATTGATAATATCACATATGCTCATGCTTTGTCTTATGCTAATTCTACTAATAACCCTCAAGTGGAGATACTCAAGAGTGAAGCCTTGAATGATCCTAATGCTCCATACATAGCTGATTTCTCTTCTAGAGGACCAAACCCATTAATCCCAGAAATTTTAAAGCCAGACATAACTGCCCCCGGAGTTGAAATATTGGCAGCTTTTTCGCCTAATGGTCTCCCTCGAGGATTGACGGAGATATCAGGCATGTGA 1467 0.4219 MGKFLRCFANEDRQLYIVYMGSLPKNGDYSPTSHHLSMLRQVMGNDFAAHSLFRSYNRSFNGFAAKLTEQEAHNLATMDAVVSVFPSKTLQLHTTRSWDFMGFQDTRQISPAESDIITGVLDSGIWPESDSFSDLGFGPVPKKWEGTCAGGSNFTCNKKVIGARKYNDEVGSSARDNVGHGSHTASIAAGNKVKDASFYGIANGAAKGGVSSSRLAVYQVCITESCMEAAILAAFDDAIADGVDLITISVGRGVAVDIKIDVIAIGSFHAMKKGILTVHSCGNNGPDKETTSSVAPWLLSVAASTMDRRIIDKFSLGNGQIFYGRSINSFVSSGKKIPLLLGEHASLPGCDGATCGCLDPKKVKGKILLCSSEEGIKMGYYYGAFGSIANSSFQEAVVVPYPTSIIDNITYAHALSYANSTNNPQVEILKSEALNDPNAPYIADFSSRGPNPLIPEILKPDITAPGVEILAAFSPNGLPRGLTEISGM 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242026g00002 488 ProSiteProfiles Serine proteases, subtilase domain profile. 97 488 - -
Stsc242026g00002 488 Gene3D Peptidase S8/S53 domain 115 476 IPR036852 GO:0004252|GO:0006508
Stsc242026g00002 488 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 7 93 IPR037045 -
Stsc242026g00002 488 Pfam Subtilase family 114 472 IPR000209 GO:0006508|GO:0008236
Stsc242026g00002 488 Pfam Peptidase inhibitor I9 16 93 IPR010259 -
Stsc242026g00002 488 SUPERFAMILY Subtilisin-like 92 476 IPR036852 GO:0004252|GO:0006508
Stsc242026g00002 488 FunFam Subtilisin-like protease SBT5.3 6 93 - -
Stsc242026g00002 488 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 476 IPR045051 -
Stsc242026g00002 488 CDD PA_subtilisin_like 314 428 - -
Stsc242026g00002 488 Gene3D - 307 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242026g00002 Stsc-Chr242026 13128 15001 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242026g00002 10 475 Subtilisin-like Serine Gene Family AT3G46850 55.208 3.15e-178 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242026g00002 - - qsa:O6P43_020998 537.724