Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242017g00003 ATGACGGGGACGAGGCAGCCTACATGGAAGGAGAGGGAGAACAACAAGCGGAGGGAGCGGCGGCGGAGGGCGATCGCCGCCAAGATCTTCGCCGGGTTGAGAATGTATGGGAACTACAAGCTCCCGAAGCACTGCGACAACAATGAAGTTCTTAAGGCTCTGTGCAACGAAGCCGGTTGGACCGTTGAACCTGACGGCACCACGTATCGGAAGGGATGCAAACCTGCTGAACGCTTCGAAGTTGGTGGCTCTGCTGTGGCAACCCCATGTTCATCTTTCCATCCAAGTCCCTGTGCTTCCTACAATCCAAGCCCAGGATCTTCTTCATTCCCTAGCCCTCGCTCATCTCCCTTTGCCGCAAATGCCAATGCTGATCCCAATTCACTCATTCCATGGCTTAAGAACCTCTCATCTGGATCATCCTCAGCATCCTCTTCAAGGATTCACCAAATATTTCATAATGGCTCCATAAGTGCTCCTGTCACTCCTCCACTAAGCTCTCCATCTGCACGAGCAGAATGGGAAGACCAGCCTGCTCCCATGGGGGGTGTACAACAGTACTCTTTCATGCCCTCATCCACTCCTCCTAGCCCTGGACGCCAAGTTGTTGACCAAGATTGGTTTGGAAAGATTAGGGCTCCGCAGGATGATGGGACAACTTCTCCAACCTTCAGCTTGGTCTCCTCAAATCCATTTGGCGTTAAGGAGGAGAATCTTGGTGGAAGTAGCTCTTGCAACTGGACGCCAATTCCTAGTGGTACTTGTTCTCCTATTGTTGCGGCAAGCTCTGATCGCACGGTAGATACTCTGATGGCGGAAGCTGCTTGTGATGAGTTTGCCTTTGGAAGCACCAGAAAAGGTTTTGTAAATGCTTGGCAAGGAGAGAGGATTGTTATTGGATCTGATGATCTTGAGCTCACCCTTGGGAGCTCAAAAACCAGGCAAACTTCTGCATAA 957 0.512 MTGTRQPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPAERFEVGGSAVATPCSSFHPSPCASYNPSPGSSSFPSPRSSPFAANANADPNSLIPWLKNLSSGSSSASSSRIHQIFHNGSISAPVTPPLSSPSARAEWEDQPAPMGGVQQYSFMPSSTPPSPGRQVVDQDWFGKIRAPQDDGTTSPTFSLVSSNPFGVKEENLGGSSSCNWTPIPSGTCSPIVAASSDRTVDTLMAEAACDEFAFGSTRKGFVNAWQGERIVIGSDDLELTLGSSKTRQTSA 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242017g00003 318 MobiDBLite consensus disorder prediction 156 175 - -
Stsc242017g00003 318 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 137 IPR008540 -
Stsc242017g00003 318 MobiDBLite consensus disorder prediction 1 20 - -
Stsc242017g00003 318 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 3 314 IPR033264 GO:0003700|GO:0006351|GO:0009742
Stsc242017g00003 318 MobiDBLite consensus disorder prediction 97 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242017g00003 Stsc-Chr242017 25804 29252 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242017g00003 2 314 BZR Transcription Factor Family AT1G78700 62.349 7.47e-105 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Stsc242017g00003 BES1_N 6.2e-64 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242017g00003 - - cill:122280541 399.053