Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242009g00001 CACCACCAACTCGCCCAACAAATCATTGCCATCTCCGACGTCCTCTCCGCTGCTCACACCCGCGACTGGTACTCCCTCCTCCAGCTCCGCTCCTCCGACTTCGCCGGCGACCTCTCGTTCCCTCGGCAGCAGTTCAAGAAGCTCGCACTCCTCTTAGACACCAACACCAACACCTTCCCTCTCTCAGACGAAGCCCTCACGTGCCTCGCTGAGGCTTGGCACGTGCTCGCTGACCCCCAAAGGCGCCAAATGTACGACCTCGAGGTCGCGGGTGAACTGCCGCCGCAGCCGCAGCCGCAGCCACCGCCAACACCGCAGGCACCACCAATGCAGCAGCCACAGCCACAGCCACAGCAGCAGCAGCAGCAGCCTTTGTGGGGCACGTTCTGGACAGTGTGCCCATACTGCTGGAAAATGTACGAGTACGAGGAGGCGTACGAGGATTGCGCTTTGAGGTGCGAGGGTTGTGGGAAAGTGTTTCATGGCGTGGCGGTGAAGCCTCCGGTAAGGGATGAGACGGTGGTGGTTGAGGGACAGAGGAGGGAGTACTATAAGTGTGACGCGAGTGTGCCATTGAAGTATTACGAGGTTTTGGAGAAGCCGGAAAATAAGAACTTCAATGAAGAAAATTTTGTTAATATCTCTGATGATGATGGAGATGACCTTTTCGGAAAGGGTAATGATGTGGGAAATGATAGGGTGTTTCATCAGGGGAATGTCAATGGAAGCGTGGATTCGCAATGGAATAGCTATAATAATAGTGGGAATAACAACAATGGGAAGGGGGGTATGAGAGTGAAGACTGTGGCAAAGAAGATGGTTGGGAACAGGATGACGAGGAAGCAGCACGGAGTGTTTGTTAAGGCTGATAATGATTTGGGTTCGGATATGGATGCAGATGATGATGGTGGTGAATTGGAGTTTACACAAGGGGATGATGGTGATATCTTTATTGGCGTTCGGGGTGATTAA 972 0.5319 HHQLAQQIIAISDVLSAAHTRDWYSLLQLRSSDFAGDLSFPRQQFKKLALLLDTNTNTFPLSDEALTCLAEAWHVLADPQRRQMYDLEVAGELPPQPQPQPPPTPQAPPMQQPQPQPQQQQQQPLWGTFWTVCPYCWKMYEYEEAYEDCALRCEGCGKVFHGVAVKPPVRDETVVVEGQRREYYKCDASVPLKYYEVLEKPENKNFNEENFVNISDDDGDDLFGKGNDVGNDRVFHQGNVNGSVDSQWNSYNNSGNNNNGKGGMRVKTVAKKMVGNRMTRKQHGVFVKADNDLGSDMDADDDGGELEFTQGDDGDIFIGVRGD 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242009g00001 323 SUPERFAMILY Chaperone J-domain 18 89 IPR036869 -
Stsc242009g00001 323 Gene3D DnaJ domain 16 95 IPR036869 -
Stsc242009g00001 323 MobiDBLite consensus disorder prediction 91 121 - -
Stsc242009g00001 323 MobiDBLite consensus disorder prediction 291 313 - -
Stsc242009g00001 323 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 282 - -
Stsc242009g00001 323 MobiDBLite consensus disorder prediction 94 115 - -
Stsc242009g00001 323 MobiDBLite consensus disorder prediction 295 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242009g00001 Stsc-Chr242009 3 1274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc242009g00001 3 169 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 36.559 9.50e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242009g00001 - - lang:109350398 211.846