Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc242008g00005 ATGGCTGAAGGTAGTTCGAATCAATGCTGTAATTCTAAAACAGATCAGTTTGAGGAACAATTGGAGTATGTCCCCAAGGTTGTGATGACTTTCCTAACTTGTGAAGCAGCCAATAATTTTTACAAAGAGTATGCTAAAAGAGGCGGATTTGCAACTAAAATCAGAAATTCAAATAAGAATAAAAAGACAGGTGAAATCAAGAATAAACTCATCACTTGTAACAGAGAGGGGAAAATGACATCTCACATACCTGAAGCTGAGAAGACTAATCCGATGTCTCCGGCAAACTATCCAGCAAGGATATATGTCTACATTCAGAAGAGTAATCAACAGTTTATTATTTCAAAGGTAGTTTTGGAGCATTCACATCCATGTTTCCCTGATCTAGCTGGGATGTTACCACAACATATGGGGCTCAATATGTATGTTCATCATGTCATTGAGAATAACGAACATGCAGGCATTAGACCAAGCAAAACTTATTAG 486 0.3724 MAEGSSNQCCNSKTDQFEEQLEYVPKVVMTFLTCEAANNFYKEYAKRGGFATKIRNSNKNKKTGEIKNKLITCNREGKMTSHIPEAEKTNPMSPANYPARIYVYIQKSNQQFIISKVVLEHSHPCFPDLAGMLPQHMGLNMYVHHVIENNEHAGIRPSKTY 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc242008g00005 161 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 160 - -
Stsc242008g00005 161 Pfam FAR1 DNA-binding domain 39 127 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc242008g00005 Stsc-Chr242008 31090 32001 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc242008g00005 FAR1 1e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc242008g00005 - - adu:110280446 157.532