Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241999g00008 ATGGCAAGTGTGCAAGAAATTCGAGTTCCCACTCTGTCTGGTACCTCAGAGCCACCACCTATCTTTGATGGAACTACCAGGTTGTACATCAGTTATTCTTGCCCTTTTGCACAGCGTGTATGGATCACTAGGAACCACAAGGGATTACAAGAAAAGATCAAATTAGTTCCTATTGATCTTCAGAACAAGCCTGCTTGGTACAAAGAGAAGGTCCACCCAGAAGGCAAGGTGCCATCTCTTGAACATGATGGCAAGATTTTGGTTGAGAGTATTGACTTGATCAAATACATAGATGCCAATTTCGAAGGACCATCTCTATATCCTAATGACCCTGCCAAGAAAGAATTTGGTGAGGAGCTAATTAAGTATGTTGATACTCTTACCAAAGACACGTTTGGTTCATTCAAAGGAGATCCTGTAACCAAAACTAGTGCTGCATATGACTACCTGGAGAGTGCTCTTGGTAAATATGAAGATGGCCCATTCTTCCTTGGTGAATTTAGCTTGGTGGACATTGCATATATCACATTTGTTGAAAGGTTTCAAATTGTGTTATCTCATATTTACAAGTATGACATCACTGCTGGAAGGCCTAAACTAGCTGCATGGATCGAGGAGATAAACAAGAATAATGCTTATAAGCAGACAAAACCTGAAAACCCACAAGAGTTCGTTGACTTTGTCAAGAAGCGATTCTTGGGTCAGTAG 708 0.4096 MASVQEIRVPTLSGTSEPPPIFDGTTRLYISYSCPFAQRVWITRNHKGLQEKIKLVPIDLQNKPAWYKEKVHPEGKVPSLEHDGKILVESIDLIKYIDANFEGPSLYPNDPAKKEFGEELIKYVDTLTKDTFGSFKGDPVTKTSAAYDYLESALGKYEDGPFFLGEFSLVDIAYITFVERFQIVLSHIYKYDITAGRPKLAAWIEEINKNNAYKQTKPENPQEFVDFVKKRFLGQ 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241999g00008 235 Gene3D Glutaredoxin 1 102 - -
Stsc241999g00008 235 FunFam Glutathione S-transferase L2, chloroplastic 1 102 - -
Stsc241999g00008 235 Pfam Glutathione S-transferase, N-terminal domain 28 104 IPR004045 -
Stsc241999g00008 235 SUPERFAMILY Thioredoxin-like 17 106 IPR036249 -
Stsc241999g00008 235 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 24 105 IPR004045 -
Stsc241999g00008 235 SFLD Glutathione Transferase (cytosolic) 27 209 IPR040079 -
Stsc241999g00008 235 FunFam Lambda class glutathione S-transferase 103 235 - -
Stsc241999g00008 235 CDD GST_C_Lambda 110 229 - -
Stsc241999g00008 235 SUPERFAMILY GST C-terminal domain-like 101 232 IPR036282 -
Stsc241999g00008 235 PANTHER GLUTATHIONE S-TRANSFERASE L1 2 232 IPR044629 GO:0004364
Stsc241999g00008 235 Gene3D - 103 235 - -
Stsc241999g00008 235 SFLD Main (cytGST) 27 209 - -
Stsc241999g00008 235 Pfam Glutathione S-transferase, C-terminal domain 142 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241999g00008 Stsc-Chr241999 49314 51530 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241999g00008 6 233 Glutathione S-transferase Gene Family AT5G02790 67.105 8.02e-112 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241999g00008 K00799 - gmx:100793025 359.377