Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241999g00005 ATGAGTTATACATGCCCATATGCACAACGTGTATGGATCGCTAGGAATTACAAGGGACTACAAGACAAGATTGAACTGGTTCCTATTGACCTTCTCAACAAGCCTGCCTGGTATAAGGAGAAAGTCTACCCCGAAAATAAGGTGCCATGTTTGGAGCACAATGGCAAGGTCTTGGGAGAAAGTCTTGATTTGATCAAATATTTAGAGGCCAACTTCCAAGGGCCATCTCTATTTCCAACTGACCCTGCAAAGAGAGAATTTGGTGAGCAGCTAGTTGCTTATGTTGATGAGTTGTGTATGAATGTGTATGCTTCATTCAAAGGAGATACTGTGCAACAATATAGTGCTTCTTTTGATTACTTGGATAATGCTCTTGGGAGATTTGATGATGGACCCTTCTTTCTTGGCCAATTTAGTTGGGTGGATGTTGTTTATGGTCCATTTATTGAAAGATTCCACATTGTATTCTCTGAGGTGTATAAGAATGACATCACAAATGGGAGGCCTAAACTAGCACCATACATTCAGGAGCTGAGTAAGATTGATGCTTATAAGCCAACCAAGGTTGATCCGAAGGAGTTTGTTGAAATTTTCAGAATACGATTTCTGGGTCAGCAATGA 621 0.4058 MSYTCPYAQRVWIARNYKGLQDKIELVPIDLLNKPAWYKEKVYPENKVPCLEHNGKVLGESLDLIKYLEANFQGPSLFPTDPAKREFGEQLVAYVDELCMNVYASFKGDTVQQYSASFDYLDNALGRFDDGPFFLGQFSWVDVVYGPFIERFHIVFSEVYKNDITNGRPKLAPYIQELSKIDAYKPTKVDPKEFVEIFRIRFLGQQ 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241999g00005 206 SUPERFAMILY Thioredoxin-like 2 77 IPR036249 -
Stsc241999g00005 206 CDD GST_N_family 4 69 - -
Stsc241999g00005 206 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 202 IPR044629 GO:0004364
Stsc241999g00005 206 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Stsc241999g00005 206 Gene3D - 74 205 - -
Stsc241999g00005 206 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 76 IPR004045 -
Stsc241999g00005 206 Pfam Glutathione S-transferase, C-terminal domain 111 176 - -
Stsc241999g00005 206 SFLD Main (cytGST) 4 179 - -
Stsc241999g00005 206 FunFam Lambda class glutathione S-transferase 74 205 - -
Stsc241999g00005 206 SFLD Glutathione Transferase (cytosolic) 4 179 IPR040079 -
Stsc241999g00005 206 SUPERFAMILY GST C-terminal domain-like 72 201 IPR036282 -
Stsc241999g00005 206 Gene3D Glutaredoxin 1 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241999g00005 Stsc-Chr241999 46053 48219 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241999g00005 2 203 Glutathione S-transferase Gene Family AT5G02790 62.871 4.94e-96 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241999g00005 K00799 - gmx:100793025 317.775