Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241998g00009 ATGGAAAGGATTCTTGAACGATATGAGAGGTATTCATATGCGGAGAAGCAACTCATTTCAAATGATCAGCAGCTGCCAAGTGAAAACTGGATACTAGAACACGCAAAGCTCAAGGCTAGGGTGGAAGTTCTACAGAAAAATCAAAGGAATTTTATGGGGGAAGATCTCGGTAGCCTAAGTCTAAAAGAACTTCAGAATTTGGAACACCAACTTGAATCCGCCCTTAAGCACATTAGATCACGGAAGAACCAAGTCATGTATGAATCTATTTCAGAGCTTCAGAAAAAGGATAAAGCACTCCAGGAACAAAACAATGCACTAGCCAAGAAGATTAAGGAAAAAGAGAAGGCTCAAGAGGACATGCAAGCTACTACCCGTGTGCCCTCTCTTCTTATAACCGAACAGTTGGAGCCCTTCAATAATATTGGAGGCAATAGTACCCCTCAAGCAGCTGTAGGAGGTGATGGATTATTATTAGTAGATAATGAAGAAAGTACTACACCACCTCAACCTAATAATAATCATAATAATAATAACCTTCTTCCCCCTTGGATGGTTCGTCCTATAATGAATGAATGA 579 0.4007 MERILERYERYSYAEKQLISNDQQLPSENWILEHAKLKARVEVLQKNQRNFMGEDLGSLSLKELQNLEHQLESALKHIRSRKNQVMYESISELQKKDKALQEQNNALAKKIKEKEKAQEDMQATTRVPSLLITEQLEPFNNIGGNSTPQAAVGGDGLLLVDNEESTTPPQPNNNHNNNNLLPPWMVRPIMNE 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241998g00009 192 Coils Coil 90 127 - -
Stsc241998g00009 192 ProSiteProfiles K-box domain profile. 27 117 IPR002487 GO:0003700|GO:0005634|GO:0006355
Stsc241998g00009 192 Pfam K-box region 23 111 IPR002487 GO:0003700|GO:0005634|GO:0006355
Stsc241998g00009 192 MobiDBLite consensus disorder prediction 162 192 - -
Stsc241998g00009 192 Coils Coil 61 84 - -
Stsc241998g00009 192 MobiDBLite consensus disorder prediction 163 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241998g00009 Stsc-Chr241998 18450 20801 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241998g00009 1 188 MADS-box Gene Family AT5G60910 54.545 4.00e-62 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241998g00009 K09264 K09260 gmx:100784742 204.912