Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241997g00006 ATGACAGGGTTGGGATCTTCATGTGGAGCATGCAAGTTCCTAAGAAGAAAGTGTGCAAGTGGTTGTGTTTTTGCTCCTTACTTCTCCTATGACCAAGCAGCAACACATTTTGCAGCGGTTCATAAGATTTATGGGGCTAGTAATGTGTCAAAGCTATTGTCACATCTTCCAATCCTTAATAGAAGTGATGCTGCCATCACTATCACTTATGAAGCTCTTTCTCGCATGCAAGATCCTATTTATGGTTGTGTTTCTCATATCTATGCATTGCAGCAACAGGTTGCAAGCTTGCAAGAGGAGATAGATATTATTGGGAGTCTAATGGCAAATTCTACAATTGGTGCTACCAATTGTTGTGGCATCAATAATAATGTTCAAGCATCAATAACAAAAATGGACTACTCAAACTTTGGAATTATACAAGATGATAATGATGCTGTCACTACAACTCATCAATGTTATCATCAAAATCAAATGCCCAATAATATTACACTCCACCAAGGTTATGGCTTAAACATGGATATAGAGCTCCCTAATAATGATGAAAATGGGTTTGAAGGGCTTGGTGATTATACCAACTTCAATAGTTGTAGTAATAATAATCCATTAGAGAAGTTCCTATCTGGAATTGATCAAGAGGGATTCATGAACCACCCATGGTTCAAGAATAATAATGCAAACACAAAGAACTAA 693 0.3709 MTGLGSSCGACKFLRRKCASGCVFAPYFSYDQAATHFAAVHKIYGASNVSKLLSHLPILNRSDAAITITYEALSRMQDPIYGCVSHIYALQQQVASLQEEIDIIGSLMANSTIGATNCCGINNNVQASITKMDYSNFGIIQDDNDAVTTTHQCYHQNQMPNNITLHQGYGLNMDIELPNNDENGFEGLGDYTNFNSCSNNNPLEKFLSGIDQEGFMNHPWFKNNNANTKN 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241997g00006 230 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Stsc241997g00006 230 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 152 - -
Stsc241997g00006 230 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241997g00006 Stsc-Chr241997 35249 36444 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241997g00006 1 123 AS2 family AT5G06080 65.854 5.91e-56 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc241997g00006 LOB 1.7e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241997g00006 K13945 - gmx:100809636 260.381