Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241996g00005 ATGATATTCAATTTATTGGTAATCGACGATTACATTTTCGATGGGGATTTTGGTGACACAGATGGATTTGGAAATAGGGATTACGTAGGCGGGGATTCCGATTACAACCCCAAAGACGCCATAGATGAAACGAATCAGCTATATGATGAGGATGATGAGCTGCCGCAGCAGCCTGGTGGAATACACTGCGATTATGTGGAAGATGAGTTTTACGCGATTGATAATACTGATGCCATTGGGTTGATTGAATTTGTCAATTTGAGCATGGAGAAAGTCTGCCGATATCATTTCGCAGACATTGATTTGGCCTTCGAGTTCTACCAGTCTTATGCTAAGCACCACGGATTTGGCGGCAGAAGATCTAGGGCACTAAGGAGTGATAACAAAAAGCCCAAGGCTGAGACACGTTGCGGATGCCGCGCTACGATGCAGGTTCGCTTAGATGGACAATCAGACATGTATTATGTTGCATTTTTTTCCGACGAGGATAACCACCCTGTTATGGATTTGCGATTTTCCGCAATGCTCCCGCATCACAGGAGAATGAGTGAAGCGGGCATAGATCAGATGAACGACATGCGCAAGGGAGGCATTCTAGTTACCGCATCCACGATTTCCTTGCGAGCTTAG 630 0.4556 MIFNLLVIDDYIFDGDFGDTDGFGNRDYVGGDSDYNPKDAIDETNQLYDEDDELPQQPGGIHCDYVEDEFYAIDNTDAIGLIEFVNLSMEKVCRYHFADIDLAFEFYQSYAKHHGFGGRRSRALRSDNKKPKAETRCGCRATMQVRLDGQSDMYYVAFFSDEDNHPVMDLRFSAMLPHHRRMSEAGIDQMNDMRKGGILVTASTISLRA 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241996g00005 209 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 128 199 - -
Stsc241996g00005 209 Pfam FAR1 DNA-binding domain 120 168 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241996g00005 Stsc-Chr241996 35116 35921 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc241996g00005 FAR1 1.1e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241996g00005 - - ahf:112779874 180.259