Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241990g00002 ATGTTCTCAATGGAACCACATGAAAGAGAAAGTAATATTAGAGGACACACAGGTCCCCTTCGGAGTCAGAGAAAGATCCCACTTAATCAGATGAGTGGTCCATTGTATGTTTCCAATAAATCTGGAGCTCCCTTCCGGGCAGGGAAGCAACCAGCAGAAACTAAGACAGAAAAATTTCCTTCGTTCTGTGGCGGCATGGGGGAAAGTGATTTACATAACAACTATAATGGCAAAAATGAACACTTAGTAAGGTCTGGTCCACTGGGAATGTGTAATGATCCGTATTGCACGACTTGCCCGACTTACTTCAAGGCTACTCAACAAAGGAATTCAAAAGCTTCGGGTATATTCAATCCGAAGTTTCACAATTCACTTTACGGGGATGCCAAGTGTTGGGCAAGAAGACTTTCTGCCTTCTTGATTCCATATGTACCTCGAGTTATGAATCCTCATACAAAACTTGTACAACAATGGAACAAGTTTTTTGCAATTTGTTGCTTGTTGGCAATTTTTGTGGATCCATTATTTTTATTCTTGCTCTCTGTGCGGAAGGATTATAAATGTATTGTTATGAACACGCCTATGACAACATTGCTTGTTTTTCTTAGAAGCATGAACGATTTTGTATACCTCATGAACATTATTCTTCAGTTTAGGTTGGCTTATGTGGCTCCTGAGTCTAGGGTGGTCGGTGCCGGGGAATTAGTTGACCATCCTAAGAAAATTGCTCTTCATTACCTTCAGACATATTTTTTTCTTGACTTATTAGTTGTAATTCCACTTCCTCAGATAATCATATTGTTTGTAATACCACAAAACTTGGGATCATCAGGAGCAAACTATGCAAAGAATCTTTTGCGAGCCGTCATCCTTGTCCAGTATATTCCCAGATTGTGTAGGTTTCTACCAATGTTAATTTCACCAACCGGATTTGTATTTGAGTCAGCATGGGCAAATTTCTTTATAAATCTTCTCACCTTTATGCTCTCTGGTCATGTTGTTGGGTCATGGTGGTACCTCTTTGCTTTGCAGAGGGTTAATCAATGTTTACGAGATGCCTGCAAGAAATTTGGTACCGATGACTGCAAAAGATTCATCGACTGTGGTCATGAAAATGCTGAAAATTACCAAAATGAAACGAATTGGAAGCTTTGGAAAAATGACACTAATTCAATGGCTTGTTTTACTGAAGATGGTTTTTCTTATGGGATTTATCTTAAAGGTGTCAACCTAACTACACAACATAATGTGATCACCAGATATGTATATTCATCATTTTGGGGATTCCAGCAAATTAGTACTCTTGCTGGAAATTTGTCCCCAAGCTACTTTGTTTGGGAAGTCCTTTTCACCATGGCCATCATCGGAATGGGACTCTTGCTTTTTGCTCTTCTCATTGGAAACATACAGAACTTTCTTCAGGCTCTCGGTCGCAGGAGGCTAGAAATGTCACTTAGGCAACGTGATGTTGAGCAATGGATGAGTCATCGACGCTTAGCAGAAGATCTGAAAAGGAGAGTGCGACAAGCTGAACGTTACAACTGGGCTGCAACAAGAGGGGTCAATGAAGAAGTGCTTCTCGAAAATTTGCCAGAAGACCTTCAGCGGGACATTAGACGTCATCTCTTTAAATTTGTTAAGAAAGTTAGAATTTTTGCCTTGATGGATGAGCCTATCTTAGATGCCATCTGCGAGAGACTAAGACAAAAAACTTACATCAAAGGAAGCAAAGTTTTATACAATGGTGGTCTGGTAGAGAAGATGGTTTTTATCGTGCGCGGGAAATTGGAGAGCATAGGCGAAGACGGAAATGTATCTTTATCCGAAGGGGATGCTTGTGGCGAAGAACTTTTGACTTGGTGTCTTGAGCATACTTCAGCAAACAGAGATGGAGGAAAAGTAAAAATACCAAGACAGAGGTTAGTTAGCAACAGAACAGTTACTTGCTTAACAAATGTGGAGGCTTTTTCTCTCAGAGCTGCAGACCTTGAAGAAGTTACAAGCCTTTATGCGCGATTCCTGAGAAGTCCGCGTGTTCATGGAGCCATAAGGTATGAATCACCTTATTGGAGATGCTTTGCAGCAACGCGTATTCAGGTTGCATGGAGGTACAGGAAGAAACGTCTTAGTAGAACTGACACTTCACAATCACATGAAACATTATATACATAG 2172 0.4052 MFSMEPHERESNIRGHTGPLRSQRKIPLNQMSGPLYVSNKSGAPFRAGKQPAETKTEKFPSFCGGMGESDLHNNYNGKNEHLVRSGPLGMCNDPYCTTCPTYFKATQQRNSKASGIFNPKFHNSLYGDAKCWARRLSAFLIPYVPRVMNPHTKLVQQWNKFFAICCLLAIFVDPLFLFLLSVRKDYKCIVMNTPMTTLLVFLRSMNDFVYLMNIILQFRLAYVAPESRVVGAGELVDHPKKIALHYLQTYFFLDLLVVIPLPQIIILFVIPQNLGSSGANYAKNLLRAVILVQYIPRLCRFLPMLISPTGFVFESAWANFFINLLTFMLSGHVVGSWWYLFALQRVNQCLRDACKKFGTDDCKRFIDCGHENAENYQNETNWKLWKNDTNSMACFTEDGFSYGIYLKGVNLTTQHNVITRYVYSSFWGFQQISTLAGNLSPSYFVWEVLFTMAIIGMGLLLFALLIGNIQNFLQALGRRRLEMSLRQRDVEQWMSHRRLAEDLKRRVRQAERYNWAATRGVNEEVLLENLPEDLQRDIRRHLFKFVKKVRIFALMDEPILDAICERLRQKTYIKGSKVLYNGGLVEKMVFIVRGKLESIGEDGNVSLSEGDACGEELLTWCLEHTSANRDGGKVKIPRQRLVSNRTVTCLTNVEAFSLRAADLEEVTSLYARFLRSPRVHGAIRYESPYWRCFAATRIQVAWRYRKKRLSRTDTSQSHETLYT 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241990g00002 723 MobiDBLite consensus disorder prediction 1 15 - -
Stsc241990g00002 723 Gene3D - 160 476 - -
Stsc241990g00002 723 Gene3D Helix hairpin bin 478 543 - -
Stsc241990g00002 723 Gene3D Jelly Rolls 549 672 IPR014710 -
Stsc241990g00002 723 SUPERFAMILY Voltage-gated potassium channels 150 479 - -
Stsc241990g00002 723 SUPERFAMILY cAMP-binding domain-like 479 673 IPR018490 -
Stsc241990g00002 723 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 91 714 - -
Stsc241990g00002 723 ProSiteProfiles cAMP/cGMP binding motif profile. 551 618 IPR000595 -
Stsc241990g00002 723 MobiDBLite consensus disorder prediction 1 25 - -
Stsc241990g00002 723 CDD CAP_ED 551 675 IPR000595 -
Stsc241990g00002 723 Pfam Ion transport protein 160 479 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241990g00002 Stsc-Chr241990 28544 34188 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241990g00002 3 628 Ion Channels AT3G17700 63.622 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241990g00002 K05391 - gmx:100795955 1121.69