Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241987g00001 ATGGCTGCTCCTGCTACCGCTCCCGCTCCCGCTCCCGCTGCCGATGTTGATCCCGCACAGCTCGACGTCAAGCTCTTCAACAGGTGGAGCTTCGACGACGTTCAGGTGACTGACATCTCCCTTGCCGATTACATTGGAGTGGTGCCGTCAAAGCATGCGACATACGTTCCCCACACCGCCGGTAGGTACTCGGTGAAGCGTTTCAGGAAGGCACAGTGCCCTATCGTTGAGAGGCTCACCAACTCCCTCATGATGCACGGAAGAAACAATGGCAAGAAGCTTATGGCTGTTAGGATCATCAAACACGCCATGGAAATCATTCACTTGCTCACAGATCAGAACCCAATCCAAGTCATTGTTGACGCCGTCATCAACAGTGGTCCTCGTGAAGATGCAACTCGTATTGGATCCGCTGGAGTTGTTAGGAGGCAGGCTGTTGATATCTCACCGCTTCGCCGTGTCAATCAGGCCATCTATCTTCTAACAACAGGTGCACGAGAAGCTGCTTTCAGGAACATCAAGACAATTGCCGAATGCTTGGCTGATGAACTTATTAACGCAGCAAAAGGTTCATCCAACAGCTATGCTATCAAGAAAAAGGATGAGATAGAGAGAGTCGCCAAGGCCAATCGCTAA 636 0.5126 MAAPATAPAPAPAADVDPAQLDVKLFNRWSFDDVQVTDISLADYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241987g00001 211 CDD uS7_Eukaryote 24 211 IPR005716 GO:0003735|GO:0006412|GO:0015935
Stsc241987g00001 211 Pfam Ribosomal protein S7p/S5e 65 211 IPR023798 -
Stsc241987g00001 211 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 211 IPR000235 GO:0006412
Stsc241987g00001 211 ProSitePatterns Ribosomal protein S7 signature. 77 103 IPR020606 GO:0003723|GO:0003735|GO:0006412
Stsc241987g00001 211 Gene3D Ribosomal protein S7 domain 8 211 IPR036823 -
Stsc241987g00001 211 NCBIfam 30S ribosomal protein S7 23 211 IPR005716 GO:0003735|GO:0006412|GO:0015935
Stsc241987g00001 211 PANTHER RIBOSOMAL PROTEIN S7 11 211 IPR000235 GO:0006412
Stsc241987g00001 211 FunFam 40S ribosomal protein S5 9 211 - -
Stsc241987g00001 211 SUPERFAMILY Ribosomal protein S7 24 211 IPR036823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241987g00001 Stsc-Chr241987 529 3182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241987g00001 22 211 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 93.684 1.75e-135 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241987g00001 K02989 - gmx:100815850 374.015