Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241986g00002 ATGTTAATGTATTTAATTGGCTTGAATGTGCAGGGTGGGAGGATCCAAGCTTCAATTCCTCGCTCTATTTTCAACAAATATGGCAACTCTGTTGAGGAATTTAAAATGTACATAATTAGCAATTTCATAGTGCAAGACAAGAGGATAAAGACGCTTGCAGCACAACACAAATGGACTCTCACATTTTCAATCAGGACCGTTGTGGAGCTAGTTGAGGAGCCAAATTTTCCACTCAATCAATTTCGGTTTATCAATATATCCGAATTACTTACTGCTGATACAATAGATGGCTCTCAACTAATTGATATCATTGTTGAGATTGTTGGAAAGGAAGAACCAAGAGAGGTCACCCCACAGGGTGGACGCCCTACCAAGCGCCTAGCCTTGAAGATACAAGACGTTGAGAAAAACACAATTGAGGCGGTGCTATTTGGAGATATGGTGGAACAAATTCAACCACACTTGAAGGATGGTCGGGTAGAGCCACTTATTGTAGTGCTACAATTTTTTATAGCCCACAGATGGAAAGGTGAGGTCATAAGTGGTCCTCAATAG 555 0.409 MLMYLIGLNVQGGRIQASIPRSIFNKYGNSVEEFKMYIISNFIVQDKRIKTLAAQHKWTLTFSIRTVVELVEEPNFPLNQFRFINISELLTADTIDGSQLIDIIVEIVGKEEPREVTPQGGRPTKRLALKIQDVEKNTIEAVLFGDMVEQIQPHLKDGRVEPLIVVLQFFIAHRWKGEVISGPQ 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241986g00002 184 Gene3D - 75 182 IPR012340 -
Stsc241986g00002 184 Pfam Domain of unknown function DUF223 9 74 IPR003871 -
Stsc241986g00002 184 SUPERFAMILY Nucleic acid-binding proteins 81 177 IPR012340 -
Stsc241986g00002 184 Gene3D - 3 73 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241986g00002 Stsc-Chr241986 9722 10452 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241986g00002 8 159 Core DNA Replication Machinery Family AT2G06510 22.078 4.97e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241986g00002 - - aip:107635329 197.593